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agahkarakuzu committed Jul 22, 2024
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2 changes: 1 addition & 1 deletion source/BINDERHUB_TEST_MODE.rst
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Expand Up @@ -53,7 +53,7 @@ Code integration

To make changes to the K8s integration of BinderHub, such as injecting `repo2data` specific `labels` to a `build pod`, we need to bring up a BinderHub for development.

The following guidelines are inhereted from `the original BinderHub docs <https://github.com/jupyterhub/binderhub/blob/master/CONTRIBUTING.md#kubernetes-integration-changes>`_. This documentation assumes that the development
The following guidelines are inherited from `the original BinderHub docs <https://github.com/jupyterhub/binderhub/blob/master/CONTRIBUTING.md#kubernetes-integration-changes>`_. This documentation assumes that the development
is to be done in a remote node via :code:`ssh` access.

1. :code:`ssh` into the previously configured node
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2 changes: 1 addition & 1 deletion source/FAQ.rst
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Expand Up @@ -25,7 +25,7 @@ You need use less than ~7.5GB of RAM, take less than 10GB runtime storage and no
I want to contribute, how can I do that ?
:::::::::::::::::::::::::::::::::::::::::
It would be a pleasure to include external people on our project, please reach out to us via our `mattermost brainhack forum <https://mattermost.brainhack.org>`_ or #TODO:EMAIL!
There are fundamentally two ways to contribute to NeuroLibre: as a `reviewer <REVIEWER.html>`_ or as a `developper <INFRASTRUCTURE.html>`_.
There are fundamentally two ways to contribute to NeuroLibre: as a `reviewer <REVIEWER.html>`_ or as a `developer <INFRASTRUCTURE.html>`_.

The reviewer team is in charge of checking if submissions execute ok on our servers, there are also exchanging with the author to help them improve it.
Developer team works on the binderhub administration, backend workflows and frontend (including github integrations, and JOSS website template).
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4 changes: 2 additions & 2 deletions source/FULLSTACK.md
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Expand Up @@ -55,7 +55,7 @@ sudo systemctl start nfs-kernel-server
```

> [!NOTE]
> Make sure that the instance is spawned from a [Ubuntu Cloud image](https://cloud-images.ubuntu.com/) wih **generic** kernel. Instances spawned from a linux-kvm (Kernel-based Virtual Machine) optimized kernel will not support the installation of nfs-kernel-server due to the lack of necessary NFS drivers (nfsd).
> Make sure that the instance is spawned from a [Ubuntu Cloud image](https://cloud-images.ubuntu.com/) with **generic** kernel. Instances spawned from a linux-kvm (Kernel-based Virtual Machine) optimized kernel will not support the installation of nfs-kernel-server due to the lack of necessary NFS drivers (nfsd).
###### Configure NFS Exports

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* Install some basic dependencies in one line

```
sudo apt install -y curl gnupg2 software-properties-common apt-transport-https ca-certificates gpg
sudo apt install -y curl gnupg2 software-properties-common apt-transport-https ca-certificates gpg lsb-release
```

### Install Redis
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2 changes: 1 addition & 1 deletion source/INFRASTRUCTURE.rst
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Infrastructure overview
=======================

At the bottom of our infrastructure, we rely on `openstack <https://www.openstack.org/>`_ which spawns our multiple VMs (what we will reffer later as instance) and virtual volumes.
At the bottom of our infrastructure, we rely on `openstack <https://www.openstack.org/>`_ which spawns our multiple VMs (what we will refer later as instance) and virtual volumes.
After successful spawning of the instance, it is assigned a floating IP used to connect to it from the outside world.
The `cloudflare DNS <https://www.cloudflare.com/>`_ then properly configure the chosen domain name under :code:`*.conp.cloud` automatically pointing to the assigned floating IP.
When the network has been properly setup, the installation can continue with `kubernetes <https://kubernetes.io/>`_ and finishes with `BinderHub <https://BinderHub .readthedocs.io/en/latest/index.html>`_.
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4 changes: 2 additions & 2 deletions source/OVERVIEW.rst
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Expand Up @@ -96,10 +96,10 @@ Once the archival process is complete, a summary PDF is generated. This PDF is n
knowing your preprint remains reproducible and readily available to all.

All the archived reproducibility assets, cited references, and the link to the reproducible preprint are resource linked to the DOI assigned by NeuroLibre
upon publication (DOI: 10.55458/neurolibre).
upon publication (DOI: `10.55458/neurolibre`).

Similar to that in traditional preprint repositories (e.g. arXiv), NeuroLibre updates metadata relationship to an Author Accepted Manuscript (AAM) or
Version of Record (VoR) after your article has been accepted for publication by a journal, following the peer review process and any revisions
Version of Record (`VoR`) after your article has been accepted for publication by a journal, following the peer review process and any revisions

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VoR ==> for
requested by the reviewers or editors.


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