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Add topaz container from locally built singularity container
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# Set either docker or path variable | ||
#docker: | ||
path: sha256:fc657063e14271b06e34a8dd676ecf69b74cc6a8ca9c2952316f9fbc9f5f7add.sif | ||
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# change this to a URL to describe your container, or to get help | ||
url: https://github.com/tpebler/topaz | ||
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# change this to your GitHub alias (or another contact or name) | ||
maintainer: 'jterstriep' | ||
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# Any custom features? | ||
features: | ||
gpu: true | ||
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# Put custom aliases here | ||
aliases: | ||
topaz: /usr/local/conda/bin/topaz | ||
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# A description to describe your container | ||
description: A pipeline for particle detection in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Topaz also includes methods for micrograph and tomogram denoising using deep denoising models. | ||
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latest: | ||
0.2.5: sha256:fc657063e14271b06e34a8dd676ecf69b74cc6a8ca9c2952316f9fbc9f5f7add | ||
tags: | ||
0.2.5: sha256:fc657063e14271b06e34a8dd676ecf69b74cc6a8ca9c2952316f9fbc9f5f7add | ||
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