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Add topaz container from locally built singularity container
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jterstriep committed Sep 27, 2024
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27 changes: 27 additions & 0 deletions topaz/container.yaml
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# Set either docker or path variable
#docker:
path: sha256:fc657063e14271b06e34a8dd676ecf69b74cc6a8ca9c2952316f9fbc9f5f7add.sif

# change this to a URL to describe your container, or to get help
url: https://github.com/tpebler/topaz

# change this to your GitHub alias (or another contact or name)
maintainer: 'jterstriep'

# Any custom features?
features:
gpu: true

# Put custom aliases here
aliases:
topaz: /usr/local/conda/bin/topaz

# A description to describe your container
description: A pipeline for particle detection in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Topaz also includes methods for micrograph and tomogram denoising using deep denoising models.

latest:
0.2.5: sha256:fc657063e14271b06e34a8dd676ecf69b74cc6a8ca9c2952316f9fbc9f5f7add
tags:
0.2.5: sha256:fc657063e14271b06e34a8dd676ecf69b74cc6a8ca9c2952316f9fbc9f5f7add


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