Merge pull request #938 from mlcommons/937-feature-add-documentation-…

…related-to-itcr-connectivity-map

Added itcr connectivity map

docs/index.md

@@ -28,6 +28,7 @@ and **CSV inputs** that describe the training data.
 - [Usage](./usage.md)
     - [Customize the training and inference](./customize.md)
 - [Extending GaNDLF](./extending.md)
+- [ITCR Connectivity](./itcr_connectivity.md)
 - [FAQ](./faq.md)
 - [Acknowledgements](./acknowledgements.md)
 

docs/itcr_connectivity.md

@@ -0,0 +1,47 @@
+# ITCR Connectivity
+
+This section includes a reference of all ongoing and existing connections between FeTS and other projects funded under the [Informatics Technology for Cancer Research (ITCR)](https://itcr.cancer.gov/) program.
+
+A connectivity map featuring all ITCR projects can be found [here](https://www.ndexbio.org/#/network/04c0a7e8-af92-11e7-94d3-0ac135e8bacf).
+
+- [Existing Connections](#existing-connections)
+	- [DCMTK](#dcmtk)
+	- [Synapse PACS](#synapse-pacs)
+	- [FLAIM](#flaim)
+- [Ongoing Development](#ongoing-development)
+	- [XNAT](#xnat)
+    - [OHIF](#ohif) 
+    - [Radiomics.io](#radiomics)
+    - [RadXTools](#radxtools)
+	- [TCIA](#tcia)
+
+
+##  Existing Connections
+
+### DCMTK
+GaNDLF uses [DCMTK - DICOM ToolKit (DCMTK)](https://dicom.offis.de/dcmtk.php.en) (through [ITK](https://itk.org/)) for DICOM file handling. 
+
+### Synapse PACS
+[GaNDLF's Metrics Suite](https://docs.mlcommons.org/GaNDLF/usage/#generate-metrics) is used by [Synapse PACS](https://www.synapse.org/).  
+
+### FLAIM
+GaNDLF models can be ingested through FLAIM to facilitate interoperability and privacy preservation.
+
+## Ongoing Development
+
+### XNAT
+Enable the use of GaNDLF's models to databases and population cohorts defined by [XNAT](https://xnat.org).
+
+### OHIF
+Online visualization using OHIF.
+
+### Radiomics
+Extraction of downstream features of automatically generated segmentation maps using [Radiomics.io](https://www.radiomics.io/).
+
+### RadXTools
+Integration with [RadXTools](https://radxtools.github.io/) for extended functionality.
+
+### TCIA
+Integration with TCIA's REST APIs to make downloading datasets easier. 
+
+Contact [gandlf [at] mlcommons.org](mailto:[email protected]) with any questions.

mkdocs.yml

@@ -8,6 +8,7 @@ nav:
   - Usage: usage.md
   - Customize Training and Inference: customize.md
   - Extending GaNDLF: extending.md
+  - ITCR Connectivity: itcr_connectivity.md
   - FAQ: faq.md
   - Acknowledgements: acknowledgements.md
 theme: