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This repo contains all data and analyses for cancer part of mtDNA MutSpec project.

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mtdnaMutSpecOfCancers

This repo contains data and analyses of human mtDNA somatic mutations in cancer and healthy tissues.

Download human mtDNA refseqs

esearch -db nucleotide -query "ddbj_embl_genbank[filter] AND txid9606[orgn:noexp] AND complete-genome[title] AND mitochondrion[filter]" | efetch -format gb > human_mt.gb

References

  1. Yuan, Y., Ju, Y.S., Kim, Y. et al. Comprehensive molecular characterization of mitochondrial genomes in human cancers. Nat Genet 52, 342–352 (2020). https://doi.org/10.1038/s41588-019-0557-x
  2. Used Data

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This repo contains all data and analyses for cancer part of mtDNA MutSpec project.

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