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DICOM redactor improvement: Enable return of redacted bboxes #1111

Merged
merged 45 commits into from
Aug 2, 2023
Merged

DICOM redactor improvement: Enable return of redacted bboxes #1111

merged 45 commits into from
Aug 2, 2023

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niwilso
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@niwilso niwilso commented Jul 5, 2023 •
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Change Description

This PR introduces the ability to return the bounding boxes used in redaction. This may be helpful in cases where users want to evaluate or modify the redacted regions.

Issue reference

This PR fixes issue #XX

Checklist

  • I have reviewed the contribution guidelines
  • I have signed the CLA (if required)
  • My code includes unit tests
  • All unit tests and lint checks pass locally
  • My PR contains documentation updates / additions if required

@niwilso niwilso marked this pull request as ready for review July 5, 2023 21:16
ayabel
ayabel previously approved these changes Jul 6, 2023
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omri374
omri374 reviewed Jul 6, 2023
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@omri374 omri374 left a comment

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Cool! I left a comment on potentially breaking it into two methods. I would be happy to get your insights into this as I might not have all the context.

presidio-image-redactor/presidio_image_redactor/dicom_image_redactor_engine.py Outdated Show resolved Hide resolved
presidio-image-redactor/presidio_image_redactor/dicom_image_redactor_engine.py Outdated Show resolved Hide resolved
omri374
omri374 previously approved these changes Jul 13, 2023
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ayabel
ayabel previously approved these changes Jul 13, 2023
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@niwilso niwilso dismissed stale reviews from ayabel and omri374 via b54cd15 July 13, 2023 20:44
@niwilso
Commenting out all unit tests for dicom image redactor engine
bc83349
@niwilso
Comment out unit test for redact()
361e176
@niwilso
Fixing typing
0c88a00
@niwilso
Commenting out exception test for redact_and_return_bbox
4497c69
@niwilso
Updated how exceptions are handled for redact_and_return_bbox, return…
f2ad83f 
… all unit tests
@niwilso
Adding IsADirectoryError exception type
3656615
@niwilso
Commenting out happy path test for redact_and_return_bbox
eddb6a0
@niwilso
Commenting out compressed and icon_image_sequence DICOM test input im…
68a80aa 
…ages for redact_and_return_bbox happy path test
@niwilso
Commenting out the type assertions in happy path test for redact_and_…
78c9116 
…return_bbox
@niwilso
Commenting out the call count assertions in happy path for redact_and…
dec175b 
…_return_bbox
@niwilso
Update type assertion and comment out all mocking and mocking asserti…
32f0a84 
…ons for happy path test for redact_and_return_bbox
@niwilso
Commenting out all assertions in happy path test for redact_and_retur…
c3cb7f4 
…n_bbox
@niwilso
Replacing mocker.patch with mocker.patch.object for all mocked method…
3d6ceb6 
…s in happy path test for redact_and_return_bbox
@niwilso
Changing all mocker.patch.object calls into mocker.patch for happy pa…
01c80e3 
…th test for redact_and_return_bbox
@niwilso
Reintroduce assertions for happy path test for redact_and_return_bbox
2b2aa94
@niwilso
Turning off assertions for call count again for happy path for redact…
b09462a 
…_and_return_bbox
@niwilso
Making assertion for returned bbox type even more explicit for happy …
1fa6099 
…path test for redact_and_return_bbox
@niwilso
Turning off type assertions and turning on mock call count assertions…
a8fd12e 
… for happy path test for redact_and_return_bbox
@niwilso
Replacing call count assertions with assert_called_once
1be4b9d
@niwilso
Reintroducing type assertions and changing return_value to include so…
79da1ac 
…me placeholder mock data instead of being empty dictionaries in list
@niwilso
Comment out the image type assertion
35a70e3
@niwilso
Turning on image type assertion and turning off bbox type assertions
1334b4b
@niwilso
Removing assertion for dict
defdba6
@niwilso
Using isinstance instead of type ==
ebc6862
@niwilso
Removing assertions for bbox type
73400af
@niwilso niwilso merged commit e323fed into main Aug 2, 2023
23 checks passed
@omri374 omri374 deleted the niwilso/dicom/return-bboxes branch October 25, 2023 12:31
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@omri374 omri374 omri374 approved these changes

@ayabel ayabel ayabel approved these changes

@navalev navalev Awaiting requested review from navalev

@SharonHart SharonHart Awaiting requested review from SharonHart

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4 participants
@niwilso @omri374 @SharonHart @ayabel