v10.6.0

What's Changed

• Format Python source code (PR target: napa_compliance branch) by @eecavanna in #1382
• Convert insert_many_pymongo.py into click CLI command by @eecavanna in #1730
• Update connect_napa_mongo.py to output tsv with deleted record identifiers by @mbthornton-lbl in #1902
• napa_compliance branch: Update script to generate request bodies for /queries:run endpoint by @eecavanna in #1941
• Allow nmdc_data.py consumer to specify which variant of schema they want to access by @eecavanna in #2091
• Add PR template specific to the schema soft freeze (nmdc-schema) by @mslarae13 in #2105
• Use newer version of urllib3 to avoid moderate security bug by @turbomam in #2097
• manual poetry update for certifi warning by @turbomam in #2112
• Limit regex-anchoring carets (^) to LinkML settings, not structured_patterns by @turbomam in #2098
• Remove nmdc_schema/nmdc_schema_accepting_legacy_ids.yaml and all references to it by @turbomam in #2094
• Remove nmdc_schema/nmdc_schema_merged.yaml along with all references to it by @turbomam in #2099
• Create DataObject_gen_by_omics.yaml by @aclum in #2118
• 1000 model rna library preparation by @aclum in #2113
• Modeling of workflow execution activities for metatranscriptomes by @aclum in #2117
• Napa compliance by @aclum in #1246
• Add tooltip annotation for gold_path_field by @aclum in #2120
• Adding metatranscriptome FileTypeEnum permissible values by @aclum in #2115
• Make it so PR template appears when people create PRs by @eecavanna in #2128
• 2129 update range and pattern on metagenome annotation id to allow metatranscriptome workflow activities by @aclum in #2130
• Add no-op migrators to versions 10.5.6 and 10.6.0 by @pkalita-lbl in #2135

Full Changelog: v10.5.6...v10.6.0