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The attempt here is to create a central data repository that ensures FHIR-based synhronization of patient data between two instances of OpenMRS.

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OpenMRS Clinical Data Repository

Federation/Synchronization

The attempt here is to create a central data repository that ensures FHIR-based synhronization of patient data between two instances of OpenMRS. The demonstrated communication workflow involves the following components:

  • Master Patient Index (MPI) / Client Registry
  • Shared Health Record (SHR)
  • Two instances of OpenMRS

The communication between these systems utilizes the FHIR clinical data standard for representing clinical data, and is orchestrated by the OpenHIM middleware.

Installation

Install Docker

Clone the CDR Repository

git clone https://github.com/mherman22/openmrs-module-cdr.git

Pull all containers

sudo docker-compose -f docker-compose.yml pull

Start up Core containers

sudo docker-compose -f docker-compose.yml up -d openhim-core openhim-console mongo-db

Start up Openhim-config container to load configurations into the mediator

sudo docker-compose -f docker-compose.yml up -d openhim-config

Start up shr-fhir opencr-fhir opencr-es

sudo docker-compose -f docker-compose.yml up -d shr-fhir opencr-fhir opencr-es

Start up Client Registry and Shared Health Record

sudo docker-compose -f docker-compose.yml up -d shr opencr

Start up the OpenMRS instances

sudo docker-compose -f docker-compose.yml up -d openmrs-db-mysql openmrs-facilityA
sudo docker-compose -f docker-compose.yml up -d openmrs-referenceapplication-mysql openmrs-referenceapplication

login details for openhim-core

username: [email protected]
password: Admin123

Useful Docker commands

Below are a few useful Docker commands that will allow you to have better visibility into your OpenHIM/Docker setup.

Check running processes

Now that we have our OpenHIM successfully created and running, we might need to check up on our Docker processes running to find some additional metadata on our containers. Execute the below command to find all the running Docker processes.

docker ps

Access the Openhim core logs

To access the OpenHIM core logs, execute the below command within your terminal to see and follow (-f) the output of the container logs.

docker logs -f openhim-core

Stop the Docker service

docker stop <container_name or container_id>

To stop all the running OpenHIM Docker services, we need to execute the below command.

docker stop $(docker ps -a)

Inspect details of a container

docker inspect <container_name>

List available Docker networks

docker network ls

Access a terminal within a running container

docker exec -it <container_name> bash

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The attempt here is to create a central data repository that ensures FHIR-based synhronization of patient data between two instances of OpenMRS.

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