A Snakemake workflow for metagenome assembly using metaspades and metahit. It does pre-assembly merging and read-correction in order to improve the assembly and reduce memory foot print.
It is part of metagenome-atlas. For citation see the atlas repository
The usage of this workflow is described in the Snakemake Workflow Catalog.
If you use this workflow in a paper, don't forget to give credits to the authors by citing the URL of this (original) metagenome-assembly repository and its DOI (see above).