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8 Open 9 Closed
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Issues list

extract cram to bam to fastq from extract_reads
#16 opened May 27, 2020 by mcieslik-mctp
Mask genes in primary contigs? question Further information is requested
#15 opened May 27, 2020 by MBMumphrey
Don't include official alt contigs in reference? question Further information is requested
#14 opened May 27, 2020 by MBMumphrey
GFFs don't account for germline imputed indels bug Something isn't working
#13 opened May 25, 2020 by MBMumphrey
Add tune_parameters to help file documentation Improvements or additions to documentation
#12 opened May 22, 2020 by MBMumphrey
Add option to choose number of cores for a command enhancement New feature or request
#9 opened Dec 16, 2019 by MBMumphrey
Version control for tools package enhancement New feature or request
#6 opened Dec 16, 2019 by MBMumphrey
Unhelpful snakemake errors when running extract_reads with no commands
#2 opened Dec 12, 2019 by MBMumphrey
ProTip! What’s not been updated in a month: updated:<2024-10-16.