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R: updates for packages #25523

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Aug 30, 2024
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006e0ef
R-archivist: update to 2.3.8
barracuda156 Aug 30, 2024
3a09498
R-atable: update to 0.1.15
barracuda156 Aug 30, 2024
58a717a
R-bayesRecon: update to 0.3.1
barracuda156 Aug 30, 2024
41430f3
R-BTtest: update to 0.10.3
barracuda156 Aug 30, 2024
9fce156
R-circular: update to 0.5-1
barracuda156 Aug 30, 2024
2740956
R-duckdbfs: update to 0.0.7
barracuda156 Aug 30, 2024
0ebc2a4
R-FuzzySimRes: update to 0.4.3
barracuda156 Aug 30, 2024
3446187
R-gap: update to 1.6
barracuda156 Aug 30, 2024
2662727
R-ggfun: update to 0.1.6
barracuda156 Aug 30, 2024
f359e2a
R-ggrcs: update to 0.4.1
barracuda156 Aug 30, 2024
b1424d2
R-glca: update to 1.4.2
barracuda156 Aug 30, 2024
4a2de0b
R-glmmPen: update to 1.5.4.8
barracuda156 Aug 30, 2024
294f1cf
R-jstable: new port
barracuda156 Aug 30, 2024
16d1fc5
R-manynet: update to 1.0.5
barracuda156 Aug 30, 2024
6023f42
R-mockr: update to 0.2.1.9015
barracuda156 Aug 30, 2024
a68cbcd
R-nonnest2: update to 0.5-8
barracuda156 Aug 30, 2024
0bde95d
R-quanteda.textmodels: update to 0.9.8
barracuda156 Aug 30, 2024
81caa44
R-scatterpie: update to 0.2.4
barracuda156 Aug 30, 2024
b7821b0
R-servr: update to 0.31
barracuda156 Aug 30, 2024
70e192c
R-spmodel: update to 0.8.0
barracuda156 Aug 30, 2024
acf1d4b
R-startupmsg: update to 0.9.7
barracuda156 Aug 30, 2024
6f1c285
R-tables: update to 0.9.31
barracuda156 Aug 30, 2024
75d191e
R-telescope: new port
barracuda156 Aug 30, 2024
886f384
R-Ternary: update to 2.3.3
barracuda156 Aug 30, 2024
3f33b75
R-unmarked: update to 1.4.2
barracuda156 Aug 30, 2024
6857c9f
R-walker: update to 1.0.10
barracuda156 Aug 30, 2024
d2aef3a
R-WH: update to 1.1.2
barracuda156 Aug 30, 2024
6dbd219
R-distr*: update family of packages
barracuda156 Aug 30, 2024
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11 changes: 6 additions & 5 deletions R/R-BTtest/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,18 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran Paul-Haimerl BTtest 0.10.2
R.setup cran Paul-Haimerl BTtest 0.10.3
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license MIT
description Estimate the number of factors in large non-stationary datasets
description Estimate the number of factors \
in large non-stationary datasets
long_description {*}${description}
homepage https://github.com/Paul-Haimerl/BTtest
checksums rmd160 b699af2c7ff50357928ca346282f76bf0c947b69 \
sha256 6339934a3a979dff8cd45be69421e130f5a138da224d19ee6c034aeb1d8a62dc \
size 175633
checksums rmd160 0942209456ee0bfe93c30d061ff490dec21612e8 \
sha256 71cbc16c143bd5ff05e5b85a630dd7ee824f379841228cd4d3cd4e3664eae7ae \
size 176189

depends_lib-append port:R-Rcpp \
port:R-RcppArmadillo
Expand Down
10 changes: 5 additions & 5 deletions R/R-FuzzySimRes/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,16 +3,16 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran mroman FuzzySimRes 0.4.0
revision 1
R.setup cran mroman FuzzySimRes 0.4.3
revision 0
categories-append math
maintainers nomaintainer
license GPL-3
description Simulation and resampling methods for epistemic fuzzy data
long_description {*}${description}
checksums rmd160 34d9501735e3f793ed2e4218b946bae46ab4dae3 \
sha256 008ce1c0eb55d0aaff6d9443cf85d2316db38c421ec1b949f7eb3024b2fc1f7e \
size 41504
checksums rmd160 7aaf6e37f8eed6271ce4e10a936240df361c091f \
sha256 62e4a2c2158cd3a2a547fe379a89b3acfdaea723e73108179acaaee9d51fc7d7 \
size 42590

depends_lib-append port:R-FuzzyNumbers \
port:R-palasso
Expand Down
29 changes: 29 additions & 0 deletions R/R-ROptEst/Portfile
Original file line number Diff line number Diff line change
@@ -0,0 +1,29 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran r-project ROptEst 1.3.3
revision 0
categories-append math
platforms {darwin any}
maintainers nomaintainer
license LGPL-3
description Optimally Robust Estimation
long_description {*}${description}
homepage http://robast.r-forge.r-project.org
checksums rmd160 a6ca274b8950fbbd20ff525358ba7365a17f1d4f \
sha256 77e5956c3ae301251ec6992298aa4667c764e97d6f71bd8b362cca7a22382d56 \
size 162812
supported_archs noarch

depends_lib-append port:R-distr \
port:R-distrEx \
port:R-distrMod \
port:R-RandVar \
port:R-RobAStBase \
port:R-startupmsg

depends_test-append port:R-RobLox

test.run yes
30 changes: 30 additions & 0 deletions R/R-RobAStBase/Portfile
Original file line number Diff line number Diff line change
@@ -0,0 +1,30 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran r-project RobAStBase 1.2.5
revision 0
categories-append math
platforms {darwin any}
maintainers nomaintainer
license LGPL-3
description Robust Asymptotic Statistics
long_description Base S4-classes and functions for robust asymptotic statistics.
homepage https://distr.r-forge.r-project.org
checksums rmd160 c95ad6727a6654bad55e4f9ad1854313def4cd1b \
sha256 9de17eaf366a4fdbbfb5bbb6a54b307c089a2106b48038b5ef83b2b0a81d549b \
size 163684
supported_archs noarch

depends_lib-append port:R-distr \
port:R-distrEx \
port:R-distrMod \
port:R-RandVar \
port:R-rrcov \
port:R-startupmsg

depends_test-append port:R-ROptEst \
port:R-RUnit

test.run yes
21 changes: 21 additions & 0 deletions R/R-RobAStRDA/Portfile
Original file line number Diff line number Diff line change
@@ -0,0 +1,21 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran r-project RobAStRDA 1.2.1
revision 0
categories-append math
platforms {darwin any}
maintainers nomaintainer
license LGPL-3
description Interpolation grids for the R-RobASt \
family of packages
long_description {*}${description}
homepage https://r-forge.r-project.org/projects/robast
checksums rmd160 3d32a64c13003e7e6cf7bb52fc7e6211c374e9fe \
sha256 bc9827e848e413f10b8efec8e3b6b020570d2759cece619562ace041456fcc94 \
size 3545051
supported_archs noarch

test.run yes
34 changes: 34 additions & 0 deletions R/R-RobExtremes/Portfile
Original file line number Diff line number Diff line change
@@ -0,0 +1,34 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran r-project RobExtremes 1.3.0
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license LGPL-3
description Optimally robust estimation for extreme value distributions
long_description {*}${description}
homepage https://r-forge.r-project.org/projects/robast
checksums rmd160 cf8a46692028865ac28b90a24c0ad61013266009 \
sha256 a46b54edd956d619841e94d7d9e7f88bca9e6ea1bc5f80978cc8439ba757f137 \
size 135534

depends_lib-append port:R-actuar \
port:R-evd \
port:R-distr \
port:R-distrEx \
port:R-distrMod \
port:R-RandVar \
port:R-RobAStBase \
port:R-RobAStRDA \
port:R-robustbase \
port:R-ROptEst \
port:R-startupmsg

depends_test-append port:R-fitdistrplus \
port:R-ismev \
port:R-RUnit

test.run yes
28 changes: 28 additions & 0 deletions R/R-RobLox/Portfile
Original file line number Diff line number Diff line change
@@ -0,0 +1,28 @@
# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem 1.0
PortGroup R 1.0

R.setup cran r-project RobLox 1.2.1
revision 0
categories-append math
platforms {darwin any}
maintainers nomaintainer
license LGPL-3
description Optimally robust influence curves \
and estimators for location and scale
long_description {*}${description}
homepage http://robast.r-forge.r-project.org
checksums rmd160 498d1318984fe86372a7fcb321b10c168cc90492 \
sha256 42e354f5bf6ee64a719da5f65169e49e48397f8d7fc72f5b419b0fd37f868135 \
size 98839
supported_archs noarch

depends_lib-append port:R-Biobase \
port:R-distr \
port:R-distrMod \
port:R-RandVar \
port:R-RColorBrewer \
port:R-RobAStBase

test.run yes
11 changes: 5 additions & 6 deletions R/R-Ternary/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
PortSystem 1.0
PortGroup R 1.0

R.setup github ms609 Ternary 2.3.2
R.setup github ms609 Ternary 2.3.3
revision 0
categories-append graphics
platforms {darwin any}
Expand All @@ -12,17 +12,16 @@ license GPL-2+
description Create Ternary and Holdridge plots
long_description {*}${description}
homepage https://ms609.github.io/Ternary
checksums rmd160 69cf2ee75a80be94404cc2fe45eb77c0f86e290b \
sha256 aa802e75fce339b81223659d25894052db4ccb6b216637fdf6a77baa5b81ae7c \
size 778639
checksums rmd160 e82066a31131b8eed3e083e31972d4aa7affb3ec \
sha256 70a4a486ae4dca4ffbcf0b3aa6f05a1c77bc05602c71d7efba124e6ea621915e \
size 778302
github.tarball_from archive
supported_archs noarch

depends_lib-append port:R-PlotTools \
port:R-RcppHungarian \
port:R-shiny \
port:R-sp \
port:R-viridisLite
port:R-sp

# FIXME: one test fails:
# https://github.com/ms609/Ternary/issues/87
Expand Down
12 changes: 6 additions & 6 deletions R/R-WH/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -4,19 +4,19 @@ PortSystem 1.0
PortGroup R 1.0

# Revert to GitHub once updated there.
R.setup cran GuillaumeBiessy WH 1.1.1
revision 1
R.setup cran GuillaumeBiessy WH 1.1.2
revision 0
categories-append math
platforms {darwin any}
maintainers nomaintainer
license GPL-3+
description Enhanced implementation of Whittaker–Henderson smoothing
long_description {*}${description}
homepage https://github.com/GuillaumeBiessy/WH
checksums rmd160 328c4040dab55fb814d1f96af910c3e4986cca24 \
sha256 3598f5659c2ccbe5d169ee556e7f90ecccdab33df0c4528ae569df132aaac2b5 \
size 193077
checksums rmd160 73739d38861ae3043190e2749b1e1c4d5127fdbd \
sha256 9eec032f23600f803cc4315a469b435d167d810748e26dac269392b5c7f27443 \
size 193511
supported_archs noarch
platforms {darwin any}

depends_test-append port:R-knitr \
port:R-rmarkdown \
Expand Down
13 changes: 7 additions & 6 deletions R/R-archivist/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -4,19 +4,19 @@ PortSystem 1.0
PortGroup R 1.0

# GutHub version is old.
R.setup cran pbiecek archivist 2.3.6
revision 2
R.setup cran pbiecek archivist 2.3.8
revision 0
categories-append sysutils
platforms {darwin any}
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license GPL-2
description Tools for storing, restoring and searching for R objects
long_description {*}${description}
homepage https://pbiecek.github.io/archivist
checksums rmd160 7d312448d2a1003c6fdea7276727759df62e00f0 \
sha256 8991cc711e749d38c1c94953f888d4b0a07c663625eebd5aff1d8cc994f63860 \
size 240867
checksums rmd160 2caaa90a84d03ee43cc4497bd500bb3c9bbba6e3 \
sha256 f1db13bbd8af4b4269fe143e6da4ae475a917fce0dd09cd1ffe432956a6468e1 \
size 222863
supported_archs noarch
platforms {darwin any}

depends_lib-append port:R-DBI \
port:R-digest \
Expand All @@ -32,6 +32,7 @@ depends_test-append port:R-devtools \
port:R-ggplot2 \
port:R-knitr \
port:R-markdown \
port:R-rmarkdown \
port:R-shiny \
port:R-testthat

Expand Down
13 changes: 7 additions & 6 deletions R/R-atable/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,18 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran arminstroebel atable 0.1.14
revision 1
R.setup cran arminstroebel atable 0.1.15
revision 0
platforms {darwin any}
maintainers nomaintainer
license GPL-3
description Create tables for reporting clinical trials
long_description {*}${description}
checksums rmd160 faec76d0555fcb5b59260a9f3c6aba2c216004b7 \
sha256 366ea0c7f49397ae0dd5764dc9636a59d549a763d0bfeec76d289414d83fcfb7 \
size 574245
homepage https://github.com/arminstroebel/atable
checksums rmd160 673265b05d571bd512529994d430c4fa863a3aa1 \
sha256 0bc04cdbf043f60b97bcf1f0fc502f185226aa9b70598e16f189328f392252f4 \
size 574386
supported_archs noarch
platforms {darwin any}

depends_lib-append port:R-DescTools \
port:R-doBy \
Expand Down
10 changes: 5 additions & 5 deletions R/R-bayesRecon/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,19 +3,19 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran dario.azzimonti bayesRecon 0.3.0
R.setup cran dario.azzimonti bayesRecon 0.3.1
revision 0
categories-append math
platforms {darwin any}
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license LGPL-3+
description Provides methods for probabilistic reconciliation \
of hierarchical forecasts of time series
long_description {*}${description}
checksums rmd160 940c954d7ea0a6f0ddfaf056b5e9edba697e2931 \
sha256 120c4275b9b44ccbab2e0c9d631fd39b523766d4078dc72fad2ea1c5c856f585 \
size 2260624
checksums rmd160 2f862c48e6a656e31286898c1be58aac98476d43 \
sha256 02e684699498dff953aacc7e69ea2d6257afee4142fce4d612b8969ac071d6ee \
size 2260920
supported_archs noarch
platforms {darwin any}

depends_lib-append port:R-lpSolve

Expand Down
10 changes: 5 additions & 5 deletions R/R-circular/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,15 +3,15 @@
PortSystem 1.0
PortGroup R 1.0

R.setup cran cran circular 0.5-0
revision 1
R.setup cran edgarcia circular 0.5-1
revision 0
maintainers nomaintainer
license GPL-2
description Circular statistics
long_description {*}${description}
checksums rmd160 96ff24d2d260b4ff458bd04325ca5903f807dee2 \
sha256 4bf4da5de29e555d1a7ae7ea64f8a5dda037e5c423f1078944f0bbb6eb9a7b92 \
size 182542
checksums rmd160 a6afd4b495b74cf9607b032acb5109c5d69f7c1b \
sha256 fb59fc9119d777fbc77fe054db83abce84c470ac3269c2aa42b5f5df7683f3d9 \
size 183830

depends_lib-append port:R-mvtnorm

Expand Down
19 changes: 14 additions & 5 deletions R/R-distr/Portfile
Original file line number Diff line number Diff line change
Expand Up @@ -3,17 +3,26 @@
PortSystem 1.0
PortGroup R 1.0

R.setup r-forge r-project distr 2.9.3
revision 1
R.setup r-forge r-project distr 2.9.5
revision 0
categories-append math
maintainers {@barracuda156 gmail.com:vital.had} openmaintainer
license LGPL-3
description Object-oriented implementation of distributions
long_description {*}${description}
homepage https://distr.r-forge.r-project.org
checksums rmd160 e34725b24d56c64b41e955d6fda67498357a644e \
sha256 fd4b2f868783c70ab77394c2faf89d81682dbda77add5fcaf1a7a673ae860da7 \
size 668295
checksums rmd160 45371456656e8f7c88fbc5122fbcae390c0cf3d8 \
sha256 70969e77a8b8ef1d0f2e384ca1ca51ca11631a1818e98e7b6d4518bbf76e318e \
size 668532

depends_lib-append port:R-sfsmisc \
port:R-startupmsg

depends_test-append port:R-distrEx \
port:R-distrMod \
port:R-knitr \
port:R-RobAStBase \
port:R-ROptEst \
port:R-svUnit

test.run yes
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