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staggered contraction code#1416

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maddyscientist merged 221 commits intodeveloplattice/quda:developfrom feature/staggered_correlatorslattice/quda:feature/staggered_correlatorsCopy head branch name to clipboardJun 15, 2024

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Commits on Aug 10, 2021

• GK merge

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Commits on Aug 23, 2021

• First implementation of the shifts required for the staggered spin-taste operator.

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• Fixed typo in prototype input for qudaShift

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Commits on Sep 3, 2021

• Bug fixes

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Commits on Sep 9, 2021

• Added covDev for staggered

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• Made the gauge field persistent

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• Cleaning stuff up

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Commits on Sep 17, 2021

• GK merge

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• Merge remote-tracking branch 'origin/feature/generic_kernel' into feature/hotqcd_correlators_gk_merged

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Commits on Sep 20, 2021

• Merge remote-tracking branch 'origin/feature/generic_kernel' into feature/hotqcd_correlators_gk_merged

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• First implementation of the shifts required for the staggered spin-taste operator.

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• Fixed typo in prototype input for qudaShift

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• Bug fixes

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• Added covDev for staggered

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• Made the gauge field persistent

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• Cleaning stuff up

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• Merge branch 'feature/spin-taste_operator' of github.com:lattice/quda into feature/spin-taste_operator

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• Tweak parameter setting calls

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Commits on Sep 21, 2021

• Merge branch 'feature/generic_kernel' into feature/spin-taste_operator

  

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Commits on Oct 8, 2021

• First implementation of the shifts required for the staggered spin-taste operator.

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• Fixed typo in prototype input for qudaShift

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• Bug fixes

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• Added covDev for staggered

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• Made the gauge field persistent

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• Cleaning stuff up

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• First implementation of the shifts required for the staggered spin-taste operator.

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• Fixed typo in prototype input for qudaShift

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• Bug fixes

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  b8cad49

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• Added covDev for staggered

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• Made the gauge field persistent

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• Cleaning stuff up

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• Tweak parameter setting calls

  

  cpviolator

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Commits on Oct 13, 2021

• Bring even with develop

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• Apply new method of ReduceArg construction

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Commits on Oct 19, 2021

• Merge branch 'feature/hotqcd_correlators_gk_merged' into try-merge

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Commits on Oct 20, 2021

• Resolve multiple definitions of blas test configuration parameters.

  

  James Simone

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Commits on Oct 22, 2021

• Spin-taste operator for MILC, v1

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• Merge branch 'feature/spin-taste_operator' of github.com:lattice/quda into feature/spin-taste_operator

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• First implementation of the shifts required for the staggered spin-taste operator.

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  a9254ed

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• Fixed typo in prototype input for qudaShift

  AlexVaq

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  511df85

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• Bug fixes

  AlexVaq

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  5ea1897

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• Added covDev for staggered

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• Made the gauge field persistent

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• Cleaning stuff up

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• First implementation of the shifts required for the staggered spin-taste operator.

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  AlexVaq

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• Fixed typo in prototype input for qudaShift

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  27871be

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• Bug fixes

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  b7f8b24

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• Added covDev for staggered

  AlexVaq

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• Made the gauge field persistent

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• Cleaning stuff up

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• Tweak parameter setting calls

  

  cpviolator

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  AlexVaq

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• Spin-taste operator for MILC, v1

  AlexVaq

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  e6db3bd

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• Bug fixes

  AlexVaq

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  5875c7f

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• Added covDev for staggered

  AlexVaq

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• Made the gauge field persistent

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  d1c8278

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• Cleaning stuff up

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• Bug fixes

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• Added covDev for staggered

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• Made the gauge field persistent

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• Cleaning stuff up

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  354eb0e

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• Merge branch 'feature/spin-taste_operator' of github.com:lattice/quda into feature/spin-taste_operator

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Commits on Oct 24, 2021

• Prevent global reduction in contraction kernels, populate a global length array with MPI local data, sum all data to node zero and return to user.

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Commits on Oct 26, 2021

• Fixed some minor potential bugs

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Commits on Nov 2, 2021

• Merge branch 'feature/spin-taste_operator' of github.com:lattice/quda into feature/spin-taste_operator

  

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Commits on Nov 11, 2021

• Dean's fix: Prevent global reduction in contraction kernels

  

  James Simone

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Commits on Nov 15, 2021

• Merge branch 'develop' into try-merge

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Commits on Nov 16, 2021

• Change vector_type to array in meson contractions.

  

  James Simone

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• Merge branch 'feature/spin-taste_operator' into merge_st_corr_with_sp_tst

  

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Commits on Nov 18, 2021

• Fix missing libmpi_cxx dependency when linking tests.

  

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• Merge branch 'try-merge' into feature/staggered_correlators_gk

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• Merge branch 'develop' into feature/staggered_correlators_gk

  

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Commits on Nov 24, 2021

• tweak output verbosity in correlation function

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• Merge remote-tracking branch 'origin' into feature/hotqcd_correlators_gk_merged

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• Rename vector_type to VectorType

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• Use correct vector type

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Commits on Dec 2, 2021

• Merge branch 'develop' into feature/staggered_correlators_gk

  

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Commits on Jan 7, 2022

• Merge branch 'develop' into try-merge

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Commits on Jan 10, 2022

• Merge branch 'develop' into try-merge

  

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Commits on Jan 11, 2022

• develop merge

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• Merge remote-tracking branch 'origin' into feature/hotqcd_correlators_gk_merged

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Commits on Jan 29, 2022

• Develop merge

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Commits on Feb 23, 2022

• Merge remote-tracking branch 'origin' into feature/hotqcd_correlators_gk_merged

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Commits on Mar 3, 2022

• Merge remote-tracking branch 'origin' into feature/hotqcd_correlators_gk_merged

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Commits on Mar 8, 2022

• develop merge

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• Merge branch 'feature/reduction_comm_cleanup' into feature/hotqcd_correlators_gk_merged

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Commits on Mar 9, 2022

• Update contrcation kernels to conform to new reduction classes

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• fix minor bugs

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Commits on Mar 10, 2022

• Mid debug checkpoint

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• Revert to old return statement

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• Merge branch 'feature/reduction_comm_cleanup' into feature/hotqcd_correlators_gk_merged

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Commits on Mar 11, 2022

• Apply changes to contraction kernels to bring into line with newer reduction code

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• Use sincos for trig in contractions

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Commits on Mar 15, 2022

• Merge branch 'develop' into feature/hotqcd_correlators_gk_merged

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Commits on Mar 17, 2022

• Merge remote-tracking branch 'origin' into feature/hotqcd_correlators_gk_merged

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Commits on Mar 22, 2022

• Remove debug printf statements and timers

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Commits on Mar 23, 2022

• Added flag to refresh the gauge field in qudaSpinTaste and qudaShift

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• Added guard for null fields

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Commits on Mar 28, 2022

• Alexei's fixes for arguments to ReduceArg.

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Commits on Mar 29, 2022

• Merge branch 'feature/staggered_correlators_gk' of github.com:lattice/quda into feature/staggered_correlators_gk

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Commits on May 4, 2022

• Merge branch 'develop' into feature/staggered_correlators_gk

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Commits on May 6, 2022

• Merge branch 'feature/hotqcd_correlators_gk_merged' into feature/staggered_correlators_gk

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Commits on May 10, 2022

• fixed compilation errors

  

  Alexei Strelchenko

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Commits on Aug 12, 2022

• Add contractions on host to contractFT_test.

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Commits on Aug 24, 2022

• Fixed bug in three- and four-link staggered spin-taste operators in spinTasteQuda.

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Commits on Oct 7, 2022

• From hotfix/cmake_nvmath_libs. Fix to allow cmake to find the math libs

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Commits on Feb 2, 2023

• Merge branch 'develop' into feature/staggered_correlators_gk

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Commits on Feb 7, 2023

• corrected develop merge, a number of minor compilation fixes

  

  Alexei Strelchenko

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Commits on Feb 13, 2023

• Merge branch 'develop' into feature/staggered_correlators_gk

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• Add make_4d_prop_quda source code file

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Commits on Feb 14, 2023

• Duplicate enum QudaContractGamma_s.

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• Restore QUDA_FFT_SYMM and QUDA_CONTRACT_TYPE enums.

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• Fixes for contaction kernels. File lib/interface_quda.cpp not compiling.

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• Restore StaggeredContract

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Commits on Mar 6, 2023

• Merge branch 'develop' into not_a_feature_rather_a_hope/staggered_correlator_gk

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Commits on Mar 8, 2023

• Edit out unwanted code, test suite compiles.

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• Clean smearing of gauge field for wilson inversions

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• Enable smearing for inverter, MG, and eigensolver. Need to think about how to handle mixed prec. Considering moving smearing call to loadGauge function.

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Commits on Mar 9, 2023

• Restore qudaContractFT to MILC.

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Commits on Mar 11, 2023

• Restore qudaContractFT signature.

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Commits on Mar 12, 2023

• Move gauge smearing to loadGaugeQuda, encapsulate smearing into gauge parameter struct, add new gauge 'gaugeWorking', change logic for gauge aliasing

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• Add boolean to gauge param to control smearing

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Commits on Mar 13, 2023

• Differentiate fermion smearing operators for staggered and Wilson types, attempt to add in correletor_test, need to revise the call to contractFT

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• Fuse wilson type fermion smearing routines

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• fix gauge pointer logic in TwoLinK

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Commits on Mar 14, 2023

• Update TwoLinkGaussianSmear interface function

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• Merge in feature/quark-smearing.milc-interface, need to rework the freeUniqueGauge to comply with gaugeWorking

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Commits on Mar 15, 2023

• Add QUDA_TWOLINK_LINKS link type, remove all gaugeWorking references, merge develop

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• Add option to save gaugeTwoLink

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• Fix typo in commit 1e1c563

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• Fixed typo

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Commits on Apr 28, 2023

• Change last arg (gauge refresh) of qudaSpinTaste to pointer

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Commits on Jun 26, 2023

• Merge branch 'hotfix/heavy-quark-restart' into not_a_feature_rather_a_hope/staggered_correlator_gk

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• Merge branch 'develop' into not_a_feature_rather_a_hope/staggered_correlator_gk

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Commits on Nov 3, 2023

• Merge branch 'develop' into not_a_feature_rather_a_hope/staggered_correlator_gk

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• Merge branch 'develop' into feature/staggered_correlators

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Commits on Nov 10, 2023

• Merge branch 'develop' into feature/staggered_correlators

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• Merge branch 'develop' into feature/staggered_correlators

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• cleaned artifacts, added Jim to co-author list

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Commits on Nov 30, 2023

• massive cleaning: removed artifacts

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• corrected zero initialization for static arrays

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• added inline keyword for applySign function

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• corrected previous commit: moved function body of applySign into operator ()

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• cleaned SpinTastePhase class

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Commits on Dec 1, 2023

• fixed commit 22b83a2

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• Merge branch 'develop' into feature/staggered_correlators

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• fixed compiler error (extra set of braces was messing)

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Commits on Dec 4, 2023

• minor cleaning of the contraction.cuh, helper structures are now moved into gamma.cuh

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• changed argument types in the interface functions (now are passed by pointers)

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• using container of fields, instead of pointers

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Commits on Dec 5, 2023

• moved objects to stack

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Commits on Dec 11, 2023

• replaced spin_ with spin

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• moved getSign sub-routine into operator()

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Commits on Dec 15, 2023

• added a spin=1 support for covdev test

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Commits on Dec 20, 2023

• now DR contraction kernel is isolated (but share uniform control structure), a couple of minor fixes

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• removed correlator test

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Commits on Jan 2, 2024

• Merge branch 'develop' into feature/staggered_correlators

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• minor cleaning of the contraction kernel, add doxygen

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Commits on Jan 12, 2024

• Clean up profiling

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• Switch on CONTRACT, COVDEV and SMEAR_GAUSS_TWOLINK for cuda and rocm GitHub CI

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• For qudaSpinTaste and qudaShift, fixes three issues:

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• In qudaSpinTaste, pass the reloadGaugeField parameter by value.

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Commits on Jan 16, 2024

• Merge branch 'not_a_feature_rather_a_hope/staggered_correlator_gk' into feature/staggered_correlators

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• Delete some chiral propagator code that's orthogonal to this PR

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• Merge remote-tracking branch 'origin' into feature/staggered_correlators

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• Update CMakeLists.txt

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Commits on Jan 18, 2024

• Merge branch 'develop' into feature/staggered_correlators

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Commits on Feb 9, 2024

• updated contraction test

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• corrected previous merge, note that this is related to gauge smearing interface

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• fixed compilation issues

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• source position is now set via CL option (--prop-source-position) , defaulted to {0,0,0,0}

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Commits on Feb 16, 2024

• added missed parameter initialization

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Commits on Feb 23, 2024

• minor cleaning, commented spin=4 block

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Commits on Mar 7, 2024

• Merge branch 'develop' into feature/staggered_correlators

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Commits on Mar 8, 2024

• fixed gtest, detected mem leak

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• removed artifacts (redundant code led to memleak)

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Commits on Mar 14, 2024

• updated covdev test application (needs some cleaning, though)

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Commits on Apr 1, 2024

• Merge branch 'develop' into feature/staggered_correlators

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• modified covdev test application: added covdev_mu option

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• Merge branch 'develop' into feature/staggered_correlators

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• added error message when no direction is chosen for the covdev test

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Commits on Apr 24, 2024

• Merge branch 'develop' into feature/staggered_correlators

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• updated (corrected) doxygen comments for milc interface functions

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• corrected doxygen comments in quda.h

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• removed unnecessary argument (defaulted to zero)

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• removed fflush

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• replaced printf with printfQuda

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• corrected previous commit with more strict error message

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Commits on May 1, 2024

• Merge branch 'develop' into feature/staggered_correlators

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• enabled ctest , removed contract_test.cpp (can be re-introduced later)

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Commits on May 8, 2024

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• removed artifacts

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• removed fermion_smear_transform object

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Commits on Jun 7, 2024

• contractFT_test needs the testing cml option group

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• Kernel cleanup

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• Apply clang format

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• Update ctest to run contractFT_test with testing enabled

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Commits on Jun 11, 2024

• Merge branch 'develop' into feature/staggered_correlators

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• corrected macro in enum_quda_fortran.h

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• corrected enum_quda_fortran.h (added numerals)

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• removed obsolete file

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• removed commented snippet

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• removed mass_array

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• added a comment regarding spin=4 case

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• removed artifacts

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• added error message when test type is wrong

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• removed static constexpr var to avoid possible unintended behavior

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Commits on Jun 13, 2024

• Apply clang-format

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• Merge branch 'develop' into feature/staggered_correlators

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Commits on Jun 14, 2024

• contractFT -> contract_ft

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• Merge branch 'feature/staggered_correlators' of github.com:lattice/quda into feature/staggered_correlators

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• Remove dead code

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• Merge branch 'develop' of github.com:lattice/quda into feature/staggered_correlators

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• Contractions are now always enabled by default. Remove QUDA_CONTRACT CMake flag (and various other deprecated cmake flags)

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Commits on Jun 15, 2024

• Tweak contact_ft_test to make it more robust

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• Switch cos/sin to cospi/sinpi in contraction kernel

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• Reinstate nSpin=4 Laplace operator (closes 475)

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• Apply clang format

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• CI fix

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