maxTime flag propagates to Bacalhau Job.Spec.Timeout (#636)
#53
Workflow file for this run
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| name: goreleaser | |
| on: | |
| push: | |
| tags: | |
| - '*' | |
| permissions: | |
| contents: write | |
| jobs: | |
| goreleaser: | |
| runs-on: ubuntu-20.04 | |
| environment: releaser | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Go | |
| uses: actions/setup-go@v3 | |
| with: | |
| go-version: '1.20.4' | |
| cache: true | |
| - name: Validate Plex version and tag | |
| run: | | |
| current_version=$(grep -oP 'CurrentPlexVersion\s*=\s*"\K[^"]+' cmd/upgrade.go) | |
| tag_name=${GITHUB_REF#refs/tags/} | |
| if [ "$current_version" != "$tag_name" ]; then | |
| echo "CurrentPlexVersion in cmd/upgrade.go ($current_version) does not match tag ($tag_name)" | |
| exit 1 | |
| else | |
| echo "CurrentPlexVersion in cmd/upgrade.go ($current_version) matches tag ($tag_name)" | |
| fi | |
| - name: Run GoReleaser | |
| uses: goreleaser/goreleaser-action@v4 | |
| with: | |
| distribution: goreleaser | |
| version: latest | |
| args: release --clean | |
| env: | |
| GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| - name: Get tag name and release name | |
| id: tag_name | |
| run: | | |
| echo "::set-output name=tag::${GITHUB_REF#refs/tags/}" | |
| echo "::set-output name=release::${GITHUB_REF#refs/tags/v}" | |
| - name: Download release file | |
| run: curl -sSL https://github.com/labdao/plex/releases/download/${{ steps.tag_name.outputs.tag }}/plex_${{ steps.tag_name.outputs.release }}_linux_amd64.tar.gz -o plex_${{ steps.tag_name.outputs.release }}_linux_amd64.tar.gz | |
| - name: Extract release file | |
| run: tar -xvzf plex_${{ steps.tag_name.outputs.release }}_linux_amd64.tar.gz | |
| - name: Run Equibind | |
| run: | | |
| result_dir=$(./plex init -t tools/equibind.json -i '{"protein": ["testdata/binding/abl/7n9g.pdb"], "small_molecule": ["testdata/binding/abl/ZINC000003986735.sdf"]}' --scatteringMethod=dotProduct --autoRun=true -a test -a ci | grep 'Finished processing, results written to' | sed -n 's/^.*Finished processing, results written to //p' | sed 's/\/io.json//') | |
| cd "$result_dir/entry-0/outputs" | |
| if [ "$(find . -name '*docked.sdf' | grep 'docked.sdf')" == "" ]; then | |
| echo "No docked files found" | |
| exit 1 | |
| else | |
| echo "Docked files found:" | |
| find . -name '*docked.sdf' | grep 'docked.sdf' | |
| fi | |
| env: | |
| PLEX_ACCESS_TOKEN: ${{ secrets.PLEX_ACCESS_TOKEN }} |