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Update r.yml
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kstawiski authored Mar 29, 2021
1 parent 346e6b6 commit 312cfec
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion .github/workflows/r.yml
Original file line number Diff line number Diff line change
Expand Up @@ -16,7 +16,7 @@ jobs:
pwd
conda update --all
conda install mamba -c conda-forge
mamba install --channel "conda-forge" --channel "anaconda" --channel "r" tensorflow keras jupyter jupytext numpy pandas r-base r-devtools r-rgl r-rjava r-mnormt r-purrrogress r-xml gxx_linux-64 libxml2 pandoc r-rjava r-magick opencv pkgconfig gfortran_linux-64
mamba install --channel "conda-forge" --channel "anaconda" --channel "r" tensorflow keras jupyter jupytext numpy pandas r-base r-devtools r-rgl r-cairo r-rjava r-mnormt r-purrrogress r-xml gxx_linux-64 libxml2 pandoc r-rjava r-magick opencv pkgconfig gfortran_linux-64
echo "options(repos=structure(c(CRAN='http://cran.r-project.org')))" >> ~/.Rprofile
Rscript -e 'update.packages(ask = F); install.packages(c("devtools","remotes")); remotes::install_cran("pkgdown");'
Rscript -e 'devtools::source_url("https://raw.githubusercontent.com/kstawiski/OmicSelector/master/vignettes/setup.R")'
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