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kb_phylogenomics


The KBase Phylogenomics module offers tools for comparative phylogenomic and pangenomic analysis of genomes in KBase. More detail of the methods is forthcoming, but here are some screenshots to give the user a sense of the tools.



Phylogenetic Functional Profiler

(offers Pfam, COG, TIGRFAM, and SEED namespaces) Phylogenetic Functional Profiler



Custom FeatureSet Functional Profiler

(offers Pfam, COG, TIGRFAM, and SEED namespaces) Custom FeatureSet Functional Profiler



Pangenome Circle Plot

Pangenome Circle Plot



Pangenome Phylogenetic Accumulation

Pangenome Phylogenetic Accumulation