Global Refactoring #81
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI-with-R | |
| on: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| branches: | |
| - main | |
| - develop | |
| jobs: | |
| test: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: '3.11' # Specify the Python version you want to use | |
| - name: Install Package in Editable Mode with Python Dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -e ".[dev]" | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.3.2' # Use the R version you prefer | |
| - name: Install R packages | |
| uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache: true | |
| cache-version: 1 | |
| dependencies: 'NA' | |
| install-pandoc: false | |
| packages: | | |
| [email protected] | |
| [email protected] | |
| grf | |
| causalweight | |
| mediation | |
| - name: Install plmed package | |
| run: | | |
| R -e "pak::pkg_install('ohines/plmed')" | |
| - name: Install Pytest | |
| run: | | |
| pip install pytest | |
| - name: Run tests | |
| run: | | |
| export LD_LIBRARY_PATH=$(python -m rpy2.situation LD_LIBRARY_PATH):${LD_LIBRARY_PATH} | |
| pytest |