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Merge pull request bedapub#325 from bedapub/swalpe-newcelltypes
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Update CellTypes_v1.tsv with cyno atlas cell types
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@swalpe
swalpe authored Sep 27, 2023
2 parents 2537bba + fece300 commit 9f69929
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26 changes: 26 additions & 0 deletions besca/datasets/nomenclature/CellTypes_v1.tsv
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Expand Up @@ -409,3 +409,29 @@ molecular layer interneuron DB:0000089 MLInterneuron 5 CNS interneuron CL:00004
CNS interneuron CNS interneuron CL:0000402 CNSInterneuron 4 central nervous system neuron CL:0000679 neuron CL:0000540 neural cell CL:0002319 animal cell CL:0000548
unipolar brush cell unipolar brush cell CL:4023161 UnipolarBrush 5 CNS interneuron CL:0000402 central nervous system neuron CL:0000679 neuron CL:0000540 neural cell CL:0002319 animal cell CL:0000548
purkinje layer interneuron DB:0000090 PLInterneuron 5 CNS interneuron CL:0000402 central nervous system neuron CL:0000679 neuron CL:0000540 neural cell CL:0002319 animal cell CL:0000548
hepatic stellate cell hepatic stellate cell CL:0000632 HepStellate 3 fibroblast CL:0000057 connective tissue cell CL:0002320 animal cell CL:0000548
centrilobular region hepatocyte centrilobular region hepatocyte CL:0019029 CentrilobularHepatocyte 3 hepatocyte CL:0000182 epithelial cell CL:0000066 animal cell CL:0000548
midzonal region hepatocyte midzonal region hepatocyte CL:0019028 MidzonalHepatocyte 3 hepatocyte CL:0000182 epithelial cell CL:0000066 animal cell CL:0000548
periportal region hepatocyte periportal region hepatocyte CL:0019026 PeriportalHepatocyte 3 hepatocyte CL:0000182 epithelial cell CL:0000066 animal cell CL:0000548
enteric glial precursor cell DB:0000091 EntericGlialPC 4 enteric glial cell DB:0000050 glial cell CL:0000125 neural cell CL:0002319 animal cell CL:0000548
glandular cell of stomach glandular cell of stomach CL:0002659 GlandularStomach 3 glandular epithelial cell CL:0000150 epithelial cell CL:0000066 animal cell CL:0000548
mucous cell of stomach mucous cell of stomach CL:0002180 MucousStomach 4 glandular cell of stomach CL:0002659 glandular epithelial cell CL:0000150 epithelial cell CL:0000066 animal cell CL:0000548
parietal cell parietal cell CL:0000162 ParietalCell 4 glandular cell of stomach CL:0002659 glandular epithelial cell CL:0000150 epithelial cell CL:0000066 animal cell CL:0000548
peptic cell peptic cell CL:0000155 PepticCell 4 glandular cell of stomach CL:0002659 glandular epithelial cell CL:0000150 epithelial cell CL:0000066 animal cell CL:0000548
stomach enteroendocrine cell stomach enteroendocrine cell CL:1001517 StomachEnteroendocrine 4 glandular cell of stomach CL:0002659 glandular epithelial cell CL:0000150 epithelial cell CL:0000066 animal cell CL:0000548
skeletal muscle fiber skeletal muscle fiber CL:0008002 SkeletalMuscle 3 muscle cell CL:0000187 contractile cell CL:0000183 animal cell CL:0000548
type I muscle cell type I muscle cell CL:0002211 TypeIMuscle 4 skeletal muscle fiber CL:0008002 muscle cell CL:0000187 contractile cell CL:0000183 animal cell CL:0000548
type II muscle cell type II muscle cell CL:0002212 TypeIIMuscle 4 skeletal muscle fiber CL:0008002 muscle cell CL:0000187 contractile cell CL:0000183 animal cell CL:0000548
glandular cell of esophagus glandular cell of esophagus CL:0002657 EsophagusGlandular 3 glandular epithelial cell CL:0000150 epithelial cell CL:0000066 animal cell CL:0000548
mesothelial fibroblast of the leptomeninx mesothelial fibroblast of the leptomeninx CL:4023058 MesoFibroblastLeptomeninx 2 neural cell CL:0002319 animal cell CL:0000548
vascular leptomeningeal cell vascular leptomeningeal cell CL:4023051 VascLeptomeningeal 3 mesothelial fibroblast of the leptomeninx CL:4023058 neural cell CL:0002319 animal cell CL:0000548
chromophil cell of anterior pituitary gland chromophil cell of anterior pituitary gland CL:0000637 ChromophilAnteriorPituitary 2 neural cell CL:0002319 animal cell CL:0000548
acidophil cell of pars distalis of adenohypophysis acidophil cell of pars distalis of adenohypophysis CL:0000638 AcidophilParsDistalis 3 chromophil cell of anterior pituitary gland CL:0000637 neural cell CL:0002319 animal cell CL:0000548
basophil cell of pars distalis of adenohypophysis basophil cell of pars distalis of adenohypophysis CL:0000639 BasophilParsDistalis 3 chromophil cell of anterior pituitary gland CL:0000637 neural cell CL:0002319 animal cell CL:0000548
mammotroph mammotroph CL:0002311 Mammotroph 4 acidophil cell of pars distalis of adenohypophysis CL:0000638 chromophil cell of anterior pituitary gland CL:0000637 neural cell CL:0002319 animal cell CL:0000548
somatotroph somatotroph CL:0002312 Somatotroph 4 acidophil cell of pars distalis of adenohypophysis CL:0000638 chromophil cell of anterior pituitary gland CL:0000637 neural cell CL:0002319 animal cell CL:0000548
mammosomatotroph mammosomatotroph CL:0002310 Mammosomatotroph 4 acidophil cell of pars distalis of adenohypophysis CL:0000638 chromophil cell of anterior pituitary gland CL:0000637 neural cell CL:0002319 animal cell CL:0000548
corticotroph corticotroph CL:0002309 Corticotroph 4 basophil cell of pars distalis of adenohypophysis CL:0000639 CL:0000637 neural cell CL:0002319 animal cell CL:0000548
gonadtroph gonadtroph CL:0000437 Gonadtroph 4 basophil cell of pars distalis of adenohypophysis CL:0000639 CL:0000637 neural cell CL:0002319 animal cell CL:0000548
thyrotroph thyrotroph CL:0000476 Thyrotroph 4 basophil cell of pars distalis of adenohypophysis CL:0000639 CL:0000637 neural cell CL:0002319 animal cell CL:0000548
melanotroph DB:0000092 Melanotroph 4 basophil cell of pars distalis of adenohypophysis CL:0000639 CL:0000637 neural cell CL:0002319 animal cell CL:0000548

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