Print extra debug info for failing boozersurface test. Try 2 versions… #593
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| # This file is based on examples in | |
| # https://docs.github.com/en/actions/language-and-framework-guides/using-python-with-github-actions | |
| # Note that all the "sudo" commands here appear to cause a warning message | |
| # "sudo: setrlimit(RLIMIT_CORE): operation not permitted" | |
| # This appears to be a known harmless annoyance: | |
| # https://gitlab.alpinelinux.org/alpine/aports/-/issues/11122 | |
| name: Tests | |
| on: | |
| push: | |
| branches-ignore: [master] | |
| tags-ignore: [v*] | |
| pull_request: | |
| branches-ignore: [master] | |
| jobs: | |
| test: | |
| env: | |
| OMPI_ALLOW_RUN_AS_ROOT: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.10"] | |
| test-type: [unit] | |
| os: ["ubuntu-22.04", "ubuntu-latest"] | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| # First print out lots of information. We do this in separate | |
| # "name" blocks because otherwise the output gets mixed together | |
| # in the github actions log. | |
| - name: Print user and group id | |
| run: | | |
| set -ex | |
| id | |
| - name: PWD | |
| run: | | |
| set -ex | |
| pwd | |
| - name: ls -l | |
| run: | | |
| set -ex | |
| ls -l | |
| - name: Print python location | |
| run: | | |
| set -ex | |
| which python | |
| - name: apt-get stuff needed for libstell and vmec | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install -y build-essential gfortran openmpi-bin libopenmpi-dev libnetcdf-dev libnetcdff-dev liblapack-dev libscalapack-mpi-dev libhdf5-dev libhdf5-serial-dev git m4 libfftw3-dev libboost-all-dev libopenblas-dev | |
| - uses: actions/checkout@v4 | |
| - name: Fetch all history for all tags | |
| run: git fetch --all --tags --prune --unshallow | |
| - name: ls -l again | |
| run: | | |
| set -ex | |
| ls -l | |
| pwd | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: which python3 after python setup | |
| run: which python3 | |
| - name: which pip after python setup | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip --version | |
| - name: env after adding python | |
| run: env | |
| - name: Install python dependencies | |
| run: | | |
| sudo apt-get install graphviz graphviz-dev | |
| pip install numpy cmake scikit-build f90nml ninja wheel setuptools sympy qsc pyevtk matplotlib plotly networkx pygraphviz mpi4py h5py ground bentley_ottmann f90wrap | |
| - name: ls -l again | |
| run: | | |
| ls -l | |
| pwd | |
| - name: ls in /usr/lib/x86_64-linux-gnu | |
| run: ls -l /usr/lib/x86_64-linux-gnu | |
| - name: Add to LD_LIBRARY_PATH so scalapack etc can be found | |
| run: echo "LD_LIBRARY_PATH=/usr/lib/x86_64-linux-gnu" >> $GITHUB_ENV | |
| - name: env after adding to LD_LIBRARY_PATH | |
| run: env | |
| - name: Install simsopt package | |
| # run: env CMAKE_BUILD_TYPE=Debug pip install -v .[MPI,SPEC] | |
| # run: pip install -v ".[MPI,SPEC,VIS]" | |
| run: pip install -v "." | |
| - name: Run tests on 1 process using coverage | |
| if: contains(matrix.test-type, 'unit') | |
| run: | | |
| cd tests | |
| python -m unittest geo.test_curve_optimizable.Testing | |
| python -m unittest geo.test_boozersurface.BoozerSurfaceTests.test_boozer_surface_optimisation_convergence | |