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@susannasiebert susannasiebert released this 12 May 16:08
· 768 commits to master since this release
v3.0.1
9da7059

This is a bugfix release. It fixes the following problem(s):

  • There was small issue in pVACview where picking a different number of variants in the main table would cause changes to variant evaluations to not be recorded correctly.
  • This release also fixes a problem where loading a new set of files into pVACview would not reset previous evaluation summary counts.
  • This release fixes an error in pVACtools that would occur when a chromosomal region in the somatic VCF is not present in the proximal VCF.
  • This release adds further error checking for malformed CSQ header descriptions.
  • This release updates various code portions to remove deprecation warnings and add support for newer versions of certain dependencies (e.g. pandas).
  • This release fixes an bug with the standalone pvacseq calculate_reference_proteome_similarity command where picking a custom --match-length would throw an error.
  • Some users were reporting errors during the tmp file cleanup stages of running the various pipelines. This releases fixes that issue.
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