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@susannasiebert susannasiebert released this 18 Jan 16:12

This is a bugfix release. It fixes the following problem(s):

  • Some users have reported “Cannot open file” errors when running NetMHCstabpan. This release adds a retry when this error in encountered.
  • This release adds stricter checking to pVACbind for unsupported amino acids. Sequences containing an unsupported amino acid will be skipped. The following amino acids are supported: A, R, N, D, C, E, Q, G, H, I, L, K, M, F, P, S, T, W, Y, V.
  • Some VEP predictions for supported variant types might not contain any protein position information, rendering pVACseq unable to parse such annotations. Annotations without protein position information will now be skipped.