Update to version 1.5.11

griffithlab · Oct 5, 2020 · 9eeaf46 · 9eeaf46
1 parent 725a211
commit 9eeaf46
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Showing 4 changed files with 24 additions and 5 deletions.
diff --git a/docs/conf.py b/docs/conf.py
@@ -69,7 +69,7 @@
 # The short X.Y version.
 version = '1.5'
 # The full version, including alpha/beta/rc tags.
-release = '1.5.10'
+release = '1.5.11'
 
 # The language for content autogenerated by Sphinx. Refer to documentation
 # for a list of supported languages.

diff --git a/docs/index.rst b/docs/index.rst
@@ -52,9 +52,14 @@ New in release |release|
 
 This is a hotfix release. It fixes the following issues:
 
-- A stray character at the end of one file was causing a syntax error in Python
-  3.8. The character has been removed. pVACtools should now be 3.8 compatible
-  although some dependencies might not be compatible yet.
+- The standalone ``pvacbind top_score_filter`` command woul throw an error
+  because it wasn't set up correctly. This has now been fixed.
+- The standalone ``pvacfuse generate_protein_fasta`` would fail when run with
+  the ``--input-tsv`` option because it wasn't able to associate TSV entries
+  with the fasta entries correctly. Using this option will now correctly limit
+  the output to only entries from the input TSV file.
+- In certain situation the trimming of problematic peptides in pVACvector
+  would not work correctly. This issue has now been addressed.
 
 New in version |version|
 ------------------------

diff --git a/docs/releases/1_5.rst b/docs/releases/1_5.rst
@@ -216,3 +216,17 @@ This is a hotfix release. It fixes the following issues:
 - A stray character at the end of one file was causing a syntax error in Python
   3.8. The character has been removed. pVACtools should now be 3.8 compatible
   although some dependencies might not be compatible yet.
+
+1.5.11
+------
+
+This is a hotfix release. It fixes the following issues:
+
+- The standalone ``pvacbind top_score_filter`` command woul throw an error
+  because it wasn't set up correctly. This has now been fixed.
+- The standalone ``pvacfuse generate_protein_fasta`` would fail when run with
+  the ``--input-tsv`` option because it wasn't able to associate TSV entries
+  with the fasta entries correctly. Using this option will now correctly limit
+  the output to only entries from the input TSV file.
+- In certain situation the trimming of problematic peptides in pVACvector
+  would not work correctly. This issue has now been addressed.
diff --git a/setup.py b/setup.py
@@ -61,7 +61,7 @@
 
 setup(
     name="pvactools",
-    version="1.5.10",
+    version="1.5.11",
     packages=[
         "tools",
         "tools.pvacbind",