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Alphafold v2.3.2

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@Htomlinson14 Htomlinson14 released this 05 Apr 09:45
· 30 commits to main since this release

Change log

  • More robust download in Colab with shutil (thanks @gmihaila).
  • Added ability to only run relax for the best unrelaxed model in the run_alphafold.py.
  • Improved documentation for the ranked outputs (thanks @ulupo).
  • Removed jax dependency from results pkl.
  • Updated tensorflow to 2.11.0.
  • Improved documentation on how to install aria2c (thanks @janxkoci).
  • Made _chem_comp.type logic case-insensitive for mmCIF parsing.
  • Improved error messages when cells are submitted out of order in Colab (e.g. when the runtime restarts).
  • Fixed incorrect type annotations.
  • Bumped Python to 3.9 in Colab.
  • Improved robustness of masked softmax for bfloat16.
  • Bumped pyopenssl in Colab to patch cryptography dependency issue.