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Merge pull request #43 from glycojones/torsion_plots
Adding torsion plots to GlycanDetail display
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,80 @@ | ||
| import { useEffect, useState } from "react"; | ||
| import TorsionPlot from "./TorsionPlot"; | ||
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| function sortTorsions(torsions) { | ||
| const linkage_set = new Set(); | ||
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| torsions.map((torsion) => { | ||
| let linkage_string = "" | ||
| if (torsion.sugar_1 == "ASN") { | ||
| linkage_string = torsion.sugar_1 + "-" + torsion.atom_number_2 + "," + torsion.atom_number_1 + "-" + torsion.sugar_2 | ||
| } | ||
| else { | ||
| linkage_string = torsion.sugar_2 + "-" + torsion.atom_number_2 + "," + torsion.atom_number_1 + "-" + torsion.sugar_1 | ||
| } | ||
| linkage_set.add(linkage_string) | ||
| }) | ||
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| const linkage_array = Array.from(linkage_set) | ||
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| const sorted_linkage_array = {} | ||
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| linkage_array.map((item) => { | ||
| sorted_linkage_array[item] = [] | ||
| }) | ||
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| torsions.map((torsion) => { | ||
| let linkage_string = "" | ||
| if (torsion.sugar_1 == "ASN") { | ||
| linkage_string = torsion.sugar_1 + "-" + torsion.atom_number_2 + "," + torsion.atom_number_1 + "-" + torsion.sugar_2 | ||
| } | ||
| else { | ||
| linkage_string = torsion.sugar_2 + "-" + torsion.atom_number_2 + "," + torsion.atom_number_1 + "-" + torsion.sugar_1 | ||
| } | ||
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| sorted_linkage_array[linkage_string].push({"phi": torsion.phi, "psi": torsion.psi}) | ||
| }) | ||
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| return [linkage_array, sorted_linkage_array] | ||
| } | ||
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| function TorsionMultiPlotTabs({torsions, setTab}) { | ||
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| const [linkage_array, sorted_linkage_array] = sortTorsions(torsions) | ||
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| return ( | ||
| linkage_array.map((item, index) => { | ||
| return ( | ||
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| <li class="mr-2"> | ||
| <button class="inline-block p-4 border-b-2 border-transparent border-secondary rounded-t-lg hover:scale-105" onClick={() => {setTab(index)}}>{item}</button> | ||
| </li> | ||
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| ) | ||
| }) | ||
| ) | ||
| } | ||
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| export default function TorsionMultiPlot({torsions, tab, setTab}) { | ||
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| const [linkage_array, sorted_linkage_array] = sortTorsions(torsions) | ||
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| useEffect(() => { | ||
| console.log(tab) | ||
| setTab(0) | ||
| }, []) | ||
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| return ( | ||
| <div className="flex flex-col align-middle justify-center items-center space-y-6 "> | ||
| <div class="text-sm font-medium text-center text-gray-500 border-gray-200 text-gray-400 border-gray-700"> | ||
| <ul class="flex flex-wrap -mb-px"> | ||
| <TorsionMultiPlotTabs torsions={torsions} setTab={setTab}/> | ||
| </ul> | ||
| </div> | ||
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| <TorsionPlot linkage_type={linkage_array[tab]} sorted_torsion_list={sorted_linkage_array}/> | ||
| </div> | ||
| ) | ||
| } |
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