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gh-398: consistent plotting for notebooks #425

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gh-398: consistent plotting for notebooks #425

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6d35d51
Set `.matplotlibrc` across all notebooks
paddyroddy Nov 15, 2024
99a6a9c
Merge branch 'main' into paddy/issue-398
paddyroddy Nov 15, 2024
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4 changes: 4 additions & 0 deletions .matplotlibrc
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Original file line number Diff line number Diff line change
@@ -0,0 +1,4 @@
backend: agg
figure.dpi: 100
font.family: DejaVu Sans
savefig.dpi: 100
6 changes: 6 additions & 0 deletions examples/1-basic/density.ipynb
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Expand Up @@ -25,6 +25,9 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"from matplotlib.colors import LogNorm\n",
Expand All @@ -37,6 +40,9 @@
"import glass\n",
"import glass.ext.camb\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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6 changes: 6 additions & 0 deletions examples/1-basic/lensing.ipynb
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Expand Up @@ -30,7 +30,10 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import healpy as hp\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"\n",
Expand All @@ -42,6 +45,9 @@
"import glass\n",
"import glass.ext.camb\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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6 changes: 6 additions & 0 deletions examples/1-basic/matter.ipynb
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Expand Up @@ -26,7 +26,10 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import healpy as hp\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"\n",
Expand All @@ -38,6 +41,9 @@
"import glass\n",
"import glass.ext.camb\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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6 changes: 6 additions & 0 deletions examples/1-basic/photoz.ipynb
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Expand Up @@ -27,6 +27,9 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"\n",
Expand All @@ -36,6 +39,9 @@
"# how many arcmin2 over the entire sphere\n",
"ARCMIN2_SPHERE = 60**6 // 100 / np.pi\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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6 changes: 6 additions & 0 deletions examples/1-basic/shells.ipynb
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Expand Up @@ -29,6 +29,9 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"\n",
Expand All @@ -39,6 +42,9 @@
"import glass\n",
"import glass.ext.camb\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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6 changes: 6 additions & 0 deletions examples/2-advanced/cosmic_shear.ipynb
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Expand Up @@ -25,7 +25,10 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import healpy as hp\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"\n",
Expand All @@ -40,6 +43,9 @@
"# how many arcmin2 over the entire sphere\n",
"ARCMIN2_SPHERE = 60**6 // 100 / np.pi\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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6 changes: 6 additions & 0 deletions examples/2-advanced/stage_4_galaxies.ipynb
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Expand Up @@ -28,7 +28,10 @@
"metadata": {},
"outputs": [],
"source": [
"import pathlib\n",
"\n",
"import healpy as hp\n",
"import matplotlib as mpl\n",
"import matplotlib.pyplot as plt\n",
"import numpy as np\n",
"\n",
Expand All @@ -40,6 +43,9 @@
"import glass\n",
"import glass.ext.camb\n",
"\n",
"# set up matplotlib to produce consistent figures\n",
"mpl.rc_file(pathlib.Path.cwd().parents[1] / \".matplotlibrc\")\n",
"\n",
Comment on lines +46 to +48
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I though it automatically picks up the config from the config file in the current working directory? Is something like that not possible?

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@paddyroddy paddyroddy Nov 15, 2024 •
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From what I've read it has to be maplotlibrc (i.e. without the dot). Plus, we have notebooks in two different subfolders, so I think it's safer to force load.

"# creating a numpy random number generator for sampling\n",
"rng = np.random.default_rng(seed=42)\n",
"\n",
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