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Code for supervised learning based on cross validation of the budding yeast genome. Our two classes are : NFR (Nucleosome-free-region) and NBS (Nucleosome-binding-site)

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ggianna/NucleosomePatternClassifier

 
 

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NucleosomePatternClassifier

This project aims to evaluate different representations in genomic sequence classification. We focus on the nucleosome binding setting.

License

The code is released under Apache v2.0 license.

Roadmap

  • Debug analysis over all representations.
  • Extract and add experimental results per representation and algorithm.
  • Add Apache header to all files.

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Code for supervised learning based on cross validation of the budding yeast genome. Our two classes are : NFR (Nucleosome-free-region) and NBS (Nucleosome-binding-site)

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