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GraftM

Joel A. Boyd, Ben J. Woodcroft ##Hi there If you just want to know how to get a basic run going, an impatient peoples guide is where you want to go. If you're totally new to GraftM, you may be interested in an introduction to the way GraftM works or a little info on GraftM Packages. But for a real how-to guide on GraftM and its options, go here. When you plan on taking a look at the data, it may be worth reading these notes on further analysis.

##Installation of GraftM Soon you will be able to pip install GraftM and thus its python dependencies. However, to run GraftM relies on a few other dependencies:

• OrfM
• hmmer
• fxtract
• pplacer
• seqmagick
• krona