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GraftM

Joel A. Boyd, Ben J. Woodcroft ##Hi there If you just want to know how to get a basic run going, an impatient peoples guide is where you want to go. If you're totally new to GraftM, you may be interested in an introduction to the way GraftM works or a little info on GraftM Packages. But for a real how-to guide on GraftM and its options, go here. When you plan on taking a look at the data, it may be worth reading these notes on further analysis.

##Installation of GraftM Currently you can pip install GraftM and its python dependencies only. However, to run GraftM relies on a few other dependencies:

• OrfM
• BioPython
• hmmer
• fxtract
• pplacer
• seqmagick
• krona