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Archaea specific models in create #186

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geronimp opened this issue Apr 4, 2016 · 0 comments
Open

Archaea specific models in create #186

geronimp opened this issue Apr 4, 2016 · 0 comments

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@geronimp
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geronimp commented Apr 4, 2016

HMM-based searching is biased against archaea due to the over-representation of bacteria in the models. GraftM create needs to have some way of producing HMMs for sub-groups within gene families that are sufficiently divergent to require their own search model.

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