Merge pull request #28678 from geneontology/issue-28527

Removing MetaCyc complex xrefs.  #28527

src/ontology/go-edit.obo

@@ -90087,7 +90087,7 @@ consider: GO:0045254
 id: GO:0009353
 name: obsolete mitochondrial oxoglutarate dehydrogenase complex
 namespace: cellular_component
-def: "OBSOLETE. A mitochondrial complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) within the mitochondrial matrix." [GOC:mtg_sensu, MetaCyc:CPLX66-42, PMID:10848975]
+def: "OBSOLETE. A mitochondrial complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2) within the mitochondrial matrix." [GOC:mtg_sensu, PMID:10848975]
 comment: This term is unnecessarily taxon-specific.
 property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/26122" xsd:anyURI
 is_obsolete: true
@@ -123076,10 +123076,9 @@ name: molybdenum-iron nitrogenase complex
 namespace: cellular_component
 def: "An enzyme complex containing a molybdenum-iron cluster found in many species. It is composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase, the molybdenum-iron protein, is tetrameric with an alpha2-beta2 structure, and nitrogenase reductase is a homodimer." [PMID:11566366]
 synonym: "molybdenum-iron nitrogenase activity" RELATED []
-xref: MetaCyc:CPLX-186
-xref: MetaCyc:CPLX-525
 is_a: GO:0016610 ! nitrogenase complex
 property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/21246" xsd:anyURI
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28527" xsd:anyURI
 
 [Term]
 id: GO:0016613
@@ -251241,11 +251240,11 @@ synonym: "methanol: coenzyme M methyltransferase complex" EXACT []
 synonym: "methanol: CoM methyltransferase complex" EXACT []
 synonym: "methanol:coenzyme M methyltransferase complex" EXACT []
 synonym: "methanol:CoM methyltransferase complex" EXACT []
-xref: MetaCyc:CPLX-421
 is_a: GO:0034708 ! methyltransferase complex
 intersection_of: GO:0032991 ! protein-containing complex
 intersection_of: capable_of_part_of GO:0047152 ! methanol-5-hydroxybenzimidazolylcobamide Co-methyltransferase activity
 intersection_of: capable_of_part_of GO:1990088 ! [methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28527" xsd:anyURI
 
 [Term]
 id: GO:0043854
@@ -455147,11 +455146,11 @@ id: GO:0140690
 name: dihydropyrimidine dehydrogenase (NAD+) complex
 namespace: cellular_component
 def: "A heteromultimeric complex capable of dihydropyrimidine dehydrogenase (NAD+); in E. coli, composed of PreA and PreT." [PMID:21169495, PMID:34097066]
-xref: MetaCyc:CPLX0-7788
 is_a: GO:0032991 ! protein-containing complex
 intersection_of: GO:0032991 ! protein-containing complex
 intersection_of: capable_of GO:0004159 ! dihydropyrimidine dehydrogenase (NAD+) activity
 property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/21891" xsd:anyURI
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28527" xsd:anyURI
 created_by: pg
 creation_date: 2021-08-04T05:52:44Z