Merge pull request #28549 from geneontology/issue-28506

Obsoleted 3 glucuronoside metabolic process terms; fixes #28506

src/ontology/go-edit.obo

@@ -142869,42 +142869,44 @@ property_value: term_tracker_item "https://github.com/geneontology/go-ontology/i
 
 [Term]
 id: GO:0019389
-name: glucuronoside metabolic process
+name: obsolete glucuronoside metabolic process
 namespace: biological_process
-def: "The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate." [ISBN:0198506732]
+def: "OBSOLETE. The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate." [ISBN:0198506732]
+comment: The reason for obsoletion is that this term is an unnecessary grouping term.
 synonym: "glucuronide metabolic process" EXACT []
 synonym: "glucuronide metabolism" EXACT []
 synonym: "glucuronoside metabolism" EXACT []
-intersection_of: GO:0008152 ! metabolic process
-intersection_of: has_primary_input_or_output CHEBI:24302 ! glucosiduronic acid
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28506" xsd:anyURI
+is_obsolete: true
 
 [Term]
 id: GO:0019390
-name: glucuronoside biosynthetic process
+name: obsolete glucuronoside biosynthetic process
 namespace: biological_process
-def: "The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue." [ISBN:0198506732]
+def: "OBSOLETE. The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue." [ISBN:0198506732]
+comment: The reason for obsoletion is that this term represents a molecular function.
 synonym: "glucuronide biosynthesis" EXACT []
 synonym: "glucuronide biosynthetic process" EXACT []
 synonym: "glucuronoside anabolism" EXACT []
 synonym: "glucuronoside biosynthesis" EXACT []
 synonym: "glucuronoside formation" EXACT []
 synonym: "glucuronoside synthesis" EXACT []
-intersection_of: GO:0009058 ! biosynthetic process
-intersection_of: has_primary_output CHEBI:24302 ! glucosiduronic acid
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28506" xsd:anyURI
+is_obsolete: true
 
 [Term]
 id: GO:0019391
-name: glucuronoside catabolic process
+name: obsolete glucuronoside catabolic process
 namespace: biological_process
-def: "The chemical reactions and pathways resulting in the breakdown of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue." [ISBN:0198506732]
+def: "OBSOLETE. The chemical reactions and pathways resulting in the breakdown of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue." [ISBN:0198506732]
+comment: The reason for obsoletion is that this term represents a molecular function.
 synonym: "glucuronide catabolic process" EXACT []
 synonym: "glucuronide catabolism" EXACT []
 synonym: "glucuronoside breakdown" EXACT []
 synonym: "glucuronoside catabolism" EXACT []
 synonym: "glucuronoside degradation" EXACT []
-xref: MetaCyc:GLUCUROCAT-PWY
-intersection_of: GO:0009056 ! catabolic process
-intersection_of: has_primary_input CHEBI:24302 ! glucosiduronic acid
+property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28506" xsd:anyURI
+is_obsolete: true
 
 [Term]
 id: GO:0019392