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Merge pull request #29447 from geneontology/issue-28943
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Obsoleted 6 terms; fixes #28943.
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@raymond91125
raymond91125 authored Dec 17, 2024
2 parents ef0182a + 03b2383 commit 0f5d1cc
Showing 1 changed file with 36 additions and 26 deletions.
62 changes: 36 additions & 26 deletions src/ontology/go-edit.obo
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Original file line number Diff line number Diff line change
Expand Up @@ -370161,40 +370161,47 @@ is_a: GO:0046332 ! SMAD binding

[Term]
id: GO:0070413
name: trehalose metabolism in response to stress
name: obsolete trehalose metabolism in response to stress
namespace: biological_process
def: "The chemical reactions and pathways involving trehalose that occur as a result of a stimulus indicating the organism is under stress." [GOC:jp, GOC:mah, PMID:9797333]
def: "OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a stimulus indicating the organism is under stress." [GOC:jp, GOC:mah, PMID:9797333]
comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
synonym: "trehalose metabolic process involved in response to stress" EXACT systematic_synonym [GOC:mah]
intersection_of: GO:0005991 ! trehalose metabolic process
intersection_of: part_of GO:0006950 ! response to stress
relationship: part_of GO:0033554 ! cellular response to stress
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28943" xsd:anyURI
is_obsolete: true
replaced_by: GO:0005991

[Term]
id: GO:0070414
name: trehalose metabolism in response to heat stress
name: obsolete trehalose metabolism in response to heat stress
namespace: biological_process
def: "The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:jp, GOC:mah, PMID:9797333]
def: "OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:jp, GOC:mah, PMID:9797333]
comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
synonym: "trehalose metabolic process involved in response to heat stress" EXACT systematic_synonym [GOC:mah]
is_a: GO:0070413 ! trehalose metabolism in response to stress
relationship: part_of GO:0034605 ! cellular response to heat
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28943" xsd:anyURI
is_obsolete: true
replaced_by: GO:0005991

[Term]
id: GO:0070415
name: trehalose metabolism in response to cold stress
name: obsolete trehalose metabolism in response to cold stress
namespace: biological_process
def: "The chemical reactions and pathways involving trehalose that occur as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism." [GOC:jp, GOC:mah, PMID:9797333]
def: "OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism." [GOC:jp, GOC:mah, PMID:9797333]
comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
synonym: "trehalose metabolic process involved in response to cold stress" EXACT systematic_synonym [GOC:mah]
is_a: GO:0070413 ! trehalose metabolism in response to stress
is_a: GO:0070417 ! cellular response to cold
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28943" xsd:anyURI
is_obsolete: true
replaced_by: GO:0005991

[Term]
id: GO:0070416
name: trehalose metabolism in response to water deprivation
name: obsolete trehalose metabolism in response to water deprivation
namespace: biological_process
def: "The chemical reactions and pathways involving trehalose that occur as a result of deprivation of water." [GOC:jp, GOC:mah, PMID:9797333]
def: "OBSOLETE. The chemical reactions and pathways involving trehalose that occur as a result of deprivation of water." [GOC:jp, GOC:mah, PMID:9797333]
comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
synonym: "trehalose metabolic process involved in response to water deprivation" EXACT systematic_synonym [GOC:mah]
intersection_of: GO:0005991 ! trehalose metabolic process
intersection_of: part_of GO:0009414 ! response to water deprivation
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28943" xsd:anyURI
is_obsolete: true
replaced_by: GO:0005991

[Term]
id: GO:0070417
Expand Down Expand Up @@ -408200,24 +408207,27 @@ creation_date: 2012-08-20T14:29:42Z

[Term]
id: GO:0090441
name: trehalose biosynthesis in response to heat stress
name: obsolete trehalose biosynthesis in response to heat stress
namespace: biological_process
def: "The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:dph, GOC:tb]
def: "OBSOLETE. The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:dph, GOC:tb]
comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
synonym: "trehalose biosynthetic process in response to heat stress" EXACT systematic_synonym [GOC:tb]
is_a: GO:0005992 ! trehalose biosynthetic process
is_a: GO:0070414 ! trehalose metabolism in response to heat stress
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28943" xsd:anyURI
is_obsolete: true
replaced_by: GO:0005992
created_by: tb
creation_date: 2012-08-23T13:53:07Z

[Term]
id: GO:0090442
name: trehalose catabolism in response to heat stress
name: obsolete trehalose catabolism in response to heat stress
namespace: biological_process
def: "The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:dph, GOC:tb]
def: "OBSOLETE. The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism." [GOC:dph, GOC:tb]
comment: The reason for obsoletion is that this term is pre-composed and should be represented as a GO-CAM model.
synonym: "trehalose catabolic process in response to heat stress" EXACT systematic_synonym [GOC:tb]
is_a: GO:0005993 ! trehalose catabolic process
is_a: GO:0070414 ! trehalose metabolism in response to heat stress
relationship: part_of GO:0010353 ! response to trehalose
property_value: term_tracker_item "https://github.com/geneontology/go-ontology/issues/28943" xsd:anyURI
is_obsolete: true
replaced_by: GO:0005993
created_by: tb
creation_date: 2012-08-23T13:53:07Z

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