Add dependencies btw Github wf jobs (#174)

galaxyproject · Sep 23, 2024 · 93d9d5f · 93d9d5f
1 parent 68ac7f2
commit 93d9d5f
Showing 1 changed file with 5 additions and 3 deletions.
diff --git a/.github/workflows/fetch_filter_resources.yaml b/.github/workflows/fetch_filter_resources.yaml
@@ -28,7 +28,7 @@ jobs:
           sudo apt-get install jq
       - name: Fetch list of all available servers
         run: | 
-            python sources/bin/get_public_galaxy_servers.py -o sources/data/available_public_servers.csv
+          python sources/bin/get_public_galaxy_servers.py -o sources/data/available_public_servers.csv
       - name: Archive available servers
         uses: actions/upload-artifact@v4
         with:
@@ -37,6 +37,7 @@ jobs:
   fetch-tools-stepwise:
     runs-on: ubuntu-20.04
     name: Fetch tool stepwise
+    needs: fetch-servers
     strategy:
       #max-parallel: 1 #need to run one after another, since otherwise there is a chance, that mulitple jobs want to push to the results branch at the same time (which fails due to merge)
       matrix:
@@ -54,7 +55,7 @@ jobs:
           python-version: ${{ matrix.python-version }}
       - name: Install requirement
         run: python -m pip install -r requirements.txt
-      - name: Download a single artifact
+      - name: Download available servers
         uses: actions/download-artifact@v4
         with:
           name: available-servers
@@ -71,6 +72,7 @@ jobs:
           path: communities/all/resources/repositories${{ matrix.subset }}.list_tools.tsv
   merge-fetch-filter:
     runs-on: ubuntu-20.04
+    needs: fetch-tools-stepwise
     name: Merge tools, fetch tutorials and filter the resources for communities
     steps:
       - name: Checkout main
@@ -82,7 +84,7 @@ jobs:
         run: |
           python -m pip install -r requirements.txt
           sudo apt-get install jq
-      - name: Download All Artifacts
+      - name: Download stepwise tool lists
         uses: actions/download-artifact@v4
         with:
           pattern: tools-*