fix dry run and debug options

fulcrumgenomics · May 8, 2024 · 7bc1369 · 7bc1369
1 parent e74ed89
commit 7bc1369
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/scripts/run_snakemake.sh b/scripts/run_snakemake.sh
@@ -28,6 +28,7 @@ while getopts "s:o:c:n:d" flag; do
         o) out_dir=${OPTARG};;
         c) config_file=${OPTARG};;
         n) dry_run="-n";;
+        d) debug="--debug";;
         *) usage;;
     esac
 done