Round

epi2me-labs · Sep 12, 2024 · 95caeda · 95caeda
1 parent 0d72635
commit 95caeda
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diff --git a/bin/workflow_glue/report.py b/bin/workflow_glue/report.py
@@ -166,6 +166,7 @@ def plot_aav_structures(report, structures_file):
         with tabs.add_dropdown_menu():
 
             for sample, df_sample in df.groupby('sample_id'):
+
                 with tabs.add_dropdown_tab(sample):
                     df_sample = df_sample.sort_values('percentage', ascending=False)
                     # Plot of main genome type counts
@@ -179,6 +180,7 @@ def plot_aav_structures(report, structures_file):
 
                     # Table with counts and percentages
                     # (in lieu of being able to annotate bar plots in ezchrts)
+                    df_sample = df_sample.round({'count': 2, 'percentage': 2})
                     DataTable.from_pandas(df_sample, use_index=False)
 
 

diff --git a/main.nf b/main.nf
@@ -393,6 +393,7 @@ process makeReport {
         String report_name = "wf-aav-qc-report.html"
         String metadata = new JsonBuilder(metadata).toPrettyString()
     """
+    touch 1
     echo '${metadata}' > metadata.json
     workflow-glue report $report_name \
         --wf_version $wf_version \