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Install emmontopy from github
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jesper-friis committed Mar 26, 2024
1 parent aa23e57 commit 43f743f
Showing 1 changed file with 9 additions and 9 deletions.
18 changes: 9 additions & 9 deletions .github/workflows/cd_publish.yml
Original file line number Diff line number Diff line change
Expand Up @@ -27,7 +27,7 @@ jobs:
- name: Install EMMOntoPy and pyvode
run: |
pip install --upgrade pip
pip install EMMOntoPy pylode==2.13.2
pip install pylode==2.13.2 git+https://github.com/EMMO-REPO/EMMOntoPy.git
- name: Create build directory
run: mkdir build
Expand All @@ -37,19 +37,19 @@ jobs:

- name: Generate squashed ontology
run: ontoconvert -saw
-c "http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label"
-c "elucidation-->http://www.w3.org/2000/01/rdf-schema#comment"
-c "definition-->http://www.w3.org/2000/01/rdf-schema#comment"
-c 'http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label'
-c 'elucidation-->http://www.w3.org/2000/01/rdf-schema#comment'
-c 'definition-->http://www.w3.org/2000/01/rdf-schema#comment'
oteio.ttl build/oteio.ttl
#-c comment-->http://www.w3.org/2000/01/rdf-schema#comment
#-c 'comment-->http://www.w3.org/2000/01/rdf-schema#comment'

- name: Generate inferred ontology
run: ontoconvert -saw --reasoner=HermiT
-c "http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label"
-c "elucidation-->http://www.w3.org/2000/01/rdf-schema#comment"
-c "definition-->http://www.w3.org/2000/01/rdf-schema#comment"
-c 'http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label'
-c 'elucidation-->http://www.w3.org/2000/01/rdf-schema#comment'
-c 'definition-->http://www.w3.org/2000/01/rdf-schema#comment'
oteio.ttl build/oteio-inferred.ttl
#-c comment-->http://www.w3.org/2000/01/rdf-schema#comment
#-c 'comment-->http://www.w3.org/2000/01/rdf-schema#comment'

- name: Generate documentation
run: pylode -i build/oteio-inferred.ttl -o build/oteio.html -p ontdoc
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