Commented out creating inferred ontology #6
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| name: CD_publish | |
| on: | |
| push: | |
| #on: | |
| # push: | |
| # branches: | |
| # - '[0-9]+.[0-9]+.[0-9]+' | |
| # - '[0-9]+.[0-9]+.[0-9]+-*' | |
| # | |
| # Allows you to run this workflow manually from the Actions tab | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup Python 3.11 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: 3.11 | |
| - name: Install EMMOntoPy and pyvode | |
| run: | | |
| pip install --upgrade pip | |
| pip install pylode==2.13.2 git+https://github.com/EMMO-REPO/EMMOntoPy.git | |
| - name: Create build directory | |
| run: mkdir build | |
| - name: Copy json-ld context | |
| run: cp -r context build/. | |
| - name: Generate squashed ontology | |
| run: ontoconvert -saw | |
| -c 'http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label' | |
| -c 'elucidation-->http://www.w3.org/2000/01/rdf-schema#comment' | |
| -c 'definition-->http://www.w3.org/2000/01/rdf-schema#comment' | |
| oteio.ttl build/oteio.ttl | |
| #-c 'comment-->http://www.w3.org/2000/01/rdf-schema#comment' | |
| #- name: Generate inferred ontology | |
| # run: ontoconvert -saw --reasoner=HermiT | |
| # -c 'http://www.w3.org/2004/02/skos/core#prefLabel-->http://www.w3.org/2000/01/rdf-schema#label' | |
| # -c 'elucidation-->http://www.w3.org/2000/01/rdf-schema#comment' | |
| # -c 'definition-->http://www.w3.org/2000/01/rdf-schema#comment' | |
| # oteio.ttl build/oteio-inferred.ttl | |
| # #-c 'comment-->http://www.w3.org/2000/01/rdf-schema#comment' | |
| - name: Generate documentation | |
| #run: pylode -i build/oteio-inferred.ttl -o build/oteio.html -p ontdoc | |
| run: | | |
| pylode -i pipeline.ttl -o build/oteio.html -p ontdoc | |
| - name: Deploy | |
| uses: JamesIves/github-pages-deploy-action@v4 | |
| with: | |
| folder: build # The folder the action should deploy. |