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Merge pull request #22222 from boegel/20250128110752_new_pr_Sabre2013…
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{bio}[GCC/13.3.0] Sabre v2013-09-28
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smoors authored Jan 28, 2025
2 parents 130e8fb + 4063b98 commit 949c266
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38 changes: 38 additions & 0 deletions easybuild/easyconfigs/s/Sabre/Sabre-2013-09-28-GCC-13.3.0.eb
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easyblock = 'MakeCp'

name = 'Sabre'
local_commit = '039a55e'
version = '2013-09-28'

homepage = 'https://github.com/najoshi/sabre'
description = """Sabre is a tool that will demultiplex barcoded reads
into separate files. It will work on both single-end and paired-end
data in fastq format. It simply compares the provided barcodes with
each read and separates the read into its appropriate barcode file,
after stripping the barcode from the read (and also stripping
the quality values of the barcode bases)."""

toolchain = {'name': 'GCC', 'version': '13.3.0'}

source_urls = ['https://github.com/najoshi/sabre/archive/']
sources = [{'download_filename': '%s.tar.gz' % local_commit, 'filename': SOURCE_TAR_GZ}]
checksums = ['8101eda078eded6c755d607a83ad5c659023dad9f0f2dadc11445c0ca305bf02']

dependencies = [
('zlib', '1.3.1'),
]

buildopts = 'CC="$CC" CFLAGS="$CFLAGS"'

files_to_copy = [
(['sabre'], 'bin'),
]

sanity_check_paths = {
'files': ['bin/sabre'],
'dirs': []
}

sanity_check_commands = ['sabre --help']

moduleclass = 'bio'

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