Refresh C code + fix c.yaml following latest eurydice/krml changes #782
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The latest changes in krml/eurydice generate more precise header inclusion, meaning the mlkem avx2 public header no longer includes the sha3 avx2 public header (this is not necessary: only the mlkem avx2 C file needs that header), meaning that the intrinsics need to be directly included from the mlkem avx2 public header.