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Update LM generalist scripts#822

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anwai98 wants to merge 19 commits intodevcomputational-cell-analytics/micro-sam:devfrom lm-generalistcomputational-cell-analytics/micro-sam:lm-generalistCopy head branch name to clipboard

+316-194

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Commits on Dec 30, 2024

• Refactor lm generalist datasets and add new datasets

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  8c8b648

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• Modify .gitignore file

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  379af01

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Commits on Dec 31, 2024

• Document datasets without auto download support

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  fa764d5

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• Remove breakpoint

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  e19f423

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• Fix tissuenet normalization

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  31bc398

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• Refactor livecell dataset

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  adc2129

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• Reduce plantseg and livecell-val further

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  c9a6c8f

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• Add debugging scripts

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  f547a5d

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• Create custom raw trafo for cellpose

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  cd2d3b1

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Commits on Jan 1, 2025

• Update slurm submission scripts

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  a6d64a1

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• Update checks for instance ids

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  7159986

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• Update submission scripts

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  e154d4f

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Commits on Jan 4, 2025

• Update raw trafo for 8 bit inputs

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  efb36c6

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Commits on Jan 6, 2025

• Merge branch 'dev' into lm-generalist

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  5a0b992

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• Add supports for training SAM from scratch

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  ceaee5b

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• Merge branch 'dev' of https://github.com/computational-cell-analytics/micro-sam into lm-generalist

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  7411e80

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• Improve logic for raw trafo and checking foreground objects

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  cd1b098

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• Replace inplace tensor operations for fact

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  2beebda

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Commits on Jan 10, 2025

• Merge branch 'dev' into lm-generalist

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  48ec104

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