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BMonitor: A Python Tool for Monitoring Bsub Jobs

This library includes a few basic functions for monitoring bsub jobs, allowing a python programmer to create programmatic workflows rather than doing error checking and resubmission of failed jobs by hand.

At a small scale, it is easy enough to run and check the status of each bsub job individually. However, when running a larger quantity of sequential jobs, and especially array jobs, it is very helpful to be able to detect and potentially resolve errors programmatically. This library is designed to provide functions that can parse bsub output (especially the 'bjobs' command) and report job status in a way that can be used by a script, rather than a human.

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Python tool for monitoring bsub jobs

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