Merge branch 'release/0.3.79' into main

.coveragerc

@@ -1,4 +1,4 @@
 [run]
 include = edc_data_manager/*
 omit = edc_data_manager/tests/*,edc_data_manager/migrations/*
-branch = 1
+branch = 1

.github/workflows/build.yml

@@ -5,20 +5,17 @@ on: [push, pull_request]
 
 jobs:
   build:
-    name: build (Python ${{ matrix.python-version }}, Django ${{ matrix.django-version }})
+    name: |
+      build (Python ${{ matrix.python-version }}, Django ${{ matrix.django-version }}, ${{ matrix.database-engine }})
     runs-on: ubuntu-latest
 
     strategy:
       fail-fast: false
       matrix:
-        python-version: ['3.11', '3.12']
-        django-version: ['4.2', '5.0', 'dev']
+        python-version: ['3.12', '3.13']
+        django-version: ['5.1', 'dev']
+        database-engine: ["mysql", "postgres"]
 
-        exclude:
-          - python-version: '3.12'
-            django-version: '4.2'
-          - python-version: '3.11'
-            django-version: 'dev'
     services:
       mysql:
         image: mysql:latest
@@ -28,6 +25,17 @@ jobs:
         ports:
           - 3306:3306
         options: --health-cmd="mysqladmin ping" --health-interval=10s --health-timeout=5s --health-retries=3
+      postgres:
+        image: postgres:latest
+        env:
+          POSTGRES_PASSWORD: postgres
+        options: >-
+          --health-cmd pg_isready
+          --health-interval 10s
+          --health-timeout 5s
+          --health-retries 5
+        ports:
+          - 5432:5432
 
     steps:
       - name: Install pycups and words dependency
@@ -61,7 +69,6 @@ jobs:
           python -m pip install --upgrade pip
           python -m pip install -r https://raw.githubusercontent.com/clinicedc/edc/develop/requirements.tests/tox.txt
 
-
       - name: Tox tests
         run: |
           tox -v

.pre-commit-config.yaml

@@ -3,20 +3,20 @@ exclude: tests/etc/user-*
 
 repos:
   - repo: https://github.com/PyCQA/bandit
-    rev: 1.7.7
+    rev: 1.7.10
     hooks:
       - id: bandit
         args:
           - "-x *test*.py"
 
   - repo: https://github.com/psf/black
-    rev: 24.2.0
+    rev: 24.10.0
     hooks:
       - id: black
-        language_version: python3.11
+        language_version: python3.12
 
   - repo: https://github.com/pycqa/flake8
-    rev: 7.0.0
+    rev: 7.1.1
     hooks:
       - id: flake8
         args:
@@ -28,21 +28,24 @@ repos:
       - id: isort
 
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.5.0
+    rev: v5.0.0
     hooks:
-      - id: requirements-txt-fixer
-        files: requirements/.*\.txt$
-      - id: trailing-whitespace
       - id: check-added-large-files
-      - id: fix-byte-order-marker
       - id: check-docstring-first
       - id: check-executables-have-shebangs
       - id: check-merge-conflict
+      - id: check-toml
+      - id: check-yaml
       - id: debug-statements
       - id: detect-private-key
+      - id: end-of-file-fixer
+      - id: fix-byte-order-marker
+      - id: requirements-txt-fixer
+        files: requirements/.*\.txt$
+      - id: trailing-whitespace
 
   - repo: https://github.com/adrienverge/yamllint
-    rev: v1.34.0
+    rev: v1.35.1
     hooks:
       - id: yamllint
         args:

README.rst

@@ -295,4 +295,3 @@ For example:
 
 .. |downloads| image:: https://pepy.tech/badge/edc-data-manager
    :target: https://pepy.tech/project/edc-data-manager
-

data_manager_app/templates/data_manager_app/home.html

@@ -5,4 +5,4 @@
 
   	You are home
 
-{% endblock main %}
+{% endblock main %}

edc_data_manager/templates/edc_data_manager/bootstrap3/action_item_display_name.html

@@ -5,4 +5,4 @@
 		{{ form }} - {{ numbers }}
 	{% endfor %}
 {% endif %}
- | {{ modified|timesince:utcnow }} ago {% if auto %}[Auto]{% endif %}
+ | {{ modified|timesince:utcnow }} ago {% if auto %}[Auto]{% endif %}

edc_data_manager/templates/edc_data_manager/bootstrap3/columns/created.html

@@ -2,4 +2,4 @@
 	<span style="color:green"><i class="fas fa-check-circle fa-fw"></i></span>
 {% else %}
 	<span style="color:red"><i class="fas fa-times-circle fa-fw"></i></span>
-{% endif %}
+{% endif %}

edc_data_manager/templates/edc_data_manager/bootstrap3/columns/query_recipients.html

@@ -1,4 +1,4 @@
 <P>{% for recipient in recipients %}
 	{{ recipient.first_name }} {{ recipient.last_name }}<BR>
 {% endfor %}
-</P>
+</P>

edc_data_manager/templates/edc_data_manager/bootstrap3/default_query_text.html

@@ -1 +1 @@
-Provide responses for the listed questions.
+Provide responses for the listed questions.

edc_data_manager/templates/edc_data_manager/bootstrap3/home.html

@@ -27,9 +27,6 @@
         {% if perms.edc_appointment %}
           <a id="home_edc_appointment_admin" href="{% url 'edc_appointment_admin:edc_appointment_appointment_changelist' %}" class="list-group-item">Review Appointments</a>
         {% endif %}
-        {% if perms.canned_views %}
-          <a id="home_canned_views" href="{% url 'canned_views:home_url' %}" class="list-group-item">Custom QA Reports</a>
-        {% endif %}
         {% if perms.edc_data_manager %}
           <a id="home_edc_data_manager_admin" href="{% url 'edc_data_manager_admin:app_list' 'edc_data_manager' %}" class="list-group-item">Admin</a>
         {% endif %}

edc_data_manager/tests/holidays.csv

@@ -12,4 +12,4 @@ local_date,label,country
 2017-10-02,Public Holiday,botswana
 2017-12-25,Christmas Day,botswana
 2017-12-26,Boxing Day,botswana
-2017-01-01,New Year,botswana
+2017-01-01,New Year,botswana

pyproject.toml

@@ -1,17 +1,18 @@
 [build-system]
 requires = ["setuptools>=60", "setuptools-scm>=8.0"]
+build-backend = "setuptools.build_meta"
 
 [tool.setuptools_scm]
-version_file="_version.py"
+version_file = "_version.py"
 
 [tool.black]
 line-length = 95
-target-version = ["py311"]
+target-version = ["py312"]
 extend-exclude = '''^(.*\/)*\b(migrations)\b($|\/.*$)'''
 
 [tool.isort]
 profile = "black"
-py_version = "311"
+py_version = "312"
 skip = [".tox", ".eggs", "migrations"]
 
 [tool.coverage.run]
@@ -35,35 +36,33 @@ exclude_lines = [
 legacy_tox_ini = """
 [tox]
 envlist =
-    py{311}-dj{42,50},
-    py{312}-dj{50,dev},
+    py{312,313}-dj{51,dev},
     lint
+    pre-commit
 
 isolated_build = true
 
 [gh-actions]
 python =
-    3.11: py311
-    3.12: py312, lint
+    3.12: py312, lint, pre-commit
+    3.13: py313
 
 [gh-actions:env]
 DJANGO =
-    4.2: dj42
-    5.0: dj50
-    dev: djdev, lint
+    5.1: dj51
+    dev: djdev, lint, pre-commit
 
 [testenv]
 deps =
     -r https://raw.githubusercontent.com/clinicedc/edc/develop/requirements.tests/tox.txt
     -r https://raw.githubusercontent.com/clinicedc/edc/develop/requirements.tests/test_utils.txt
     -r https://raw.githubusercontent.com/clinicedc/edc/develop/requirements.tests/edc.txt
-    -r https://raw.githubusercontent.com/clinicedc/edc/develop/requirements.tests/third_party_dev.txt
-    dj42: Django>=4.2,<5.0
-    dj50: Django>=5.0
+    dj51: Django>=5.1,<5.2
     djdev: https://github.com/django/django/tarball/main
 
 commands =
-    pip install -U pip coverage[toml]
+    pip install -U pip
+    python --version
     pip --version
     pip freeze
     coverage run -a runtests.py
@@ -72,7 +71,19 @@ commands =
 [testenv:lint]
 deps = -r https://raw.githubusercontent.com/clinicedc/edc/develop/requirements.tests/lint.txt
 commands =
+    python --version
+    pip --version
+    pip freeze
     isort --profile=black --check --diff .
     black --check --diff .
     flake8 .
+
+[testenv:pre-commit]
+deps = pre-commit
+commands =
+    python --version
+    pip --version
+    pip freeze
+    pre-commit autoupdate
+    pre-commit run --all-files
 """

setup.cfg

@@ -12,16 +12,15 @@ keywords = django Edc, data management, CRF, clinicedc, clinical trials
 classifiers=
     Environment :: Web Environment
     Framework :: Django
-    Framework :: Django :: 4.2
+    Framework :: Django :: 5.1
     Intended Audience :: Developers
     Intended Audience :: Science/Research
     Operating System :: OS Independent
-    Programming Language :: Python :: 3.11
+    Programming Language :: Python :: 3.12
     License :: OSI Approved :: GNU General Public License v3 (GPLv3)
 
-
 [options]
-python_requires = >=3.11
+python_requires = >=3.12
 zip_safe = False
 include_package_data = True
 packages = find: