Merging main branch into staging branch

.github/dependabot.yml

@@ -1,114 +1,114 @@
-version: 2
-updates:
-  - package-ecosystem: "github-actions"
-    directory: "/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "seve"
-  - package-ecosystem: pip
-    directory: "/python_dependencies/backend/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "daily"
-    assignees:
-      - "Bento007"
-    groups:
-      database:
-        patterns:
-          - "alembic"
-          - "sqlalchemy"
-          - "psycopg2"
-      server:
-        patterns:
-          - "flask"
-          - "gunicorn"
-          - "setproctitle"
-          - "connexion"
+# version: 2
+# updates:
+#   - package-ecosystem: "github-actions"
+#     directory: "/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "seve"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/backend/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "daily"
+#     assignees:
+#       - "Bento007"
+#     groups:
+#       database:
+#         patterns:
+#           - "alembic"
+#           - "sqlalchemy"
+#           - "psycopg2"
+#       server:
+#         patterns:
+#           - "flask"
+#           - "gunicorn"
+#           - "setproctitle"
+#           - "connexion"
 
-  - package-ecosystem: pip
-    directory: "/python_dependencies/wmg/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "prathapsridharan"
-  - package-ecosystem: pip
-    directory: "/python_dependencies/upload_handler/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "ebezzi"
-  - package-ecosystem: pip
-    directory: "/python_dependencies/submissions/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "nayib-jose-gloria"
-  - package-ecosystem: pip
-    directory: "/python_dependencies/cellguide_pipeline/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "atarashansky"
-  - package-ecosystem: pip
-    directory: "/python_dependencies/processing/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "Bento007"
-    groups:
-      database:
-        patterns:
-          - "sqlalchemy*"
-          - "psycopg2*"
-      non-major-updates:
-        patterns:
-          - "*"
-        applies-to: version-updates
-        update-types:
-          - patch
-          - minor
-        exclude-patterns:
-          # The following packages do not have major versions. So a minor version updates may contain breaking changes.
-          - "anndata"
-          - "tiledb"
-          - "numba"
-          - "s3fs"
-  - package-ecosystem: pip
-    directory: "/python_dependencies/common/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "nayib-jose-gloria"
-    groups:
-      formatters:
-        patterns:
-          - "black"
-          - "ruff"
-      test-runners:
-        patterns:
-          - "pytest"
-          - "coverage"
-          - "allure"
-  - package-ecosystem: npm
-    directory: "/frontend/"
-    open-pull-requests-limit: 3
-    schedule:
-      interval: "weekly"
-      day: "sunday"
-    assignees:
-      - "tihuan"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/wmg/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "prathapsridharan"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/upload_handler/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "ebezzi"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/submissions/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "nayib-jose-gloria"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/cellguide_pipeline/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "atarashansky"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/processing/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "Bento007"
+#     groups:
+#       database:
+#         patterns:
+#           - "sqlalchemy*"
+#           - "psycopg2*"
+#       non-major-updates:
+#         patterns:
+#           - "*"
+#         applies-to: version-updates
+#         update-types:
+#           - patch
+#           - minor
+#         exclude-patterns:
+#           # The following packages do not have major versions. So a minor version updates may contain breaking changes.
+#           - "anndata"
+#           - "tiledb"
+#           - "numba"
+#           - "s3fs"
+#   - package-ecosystem: pip
+#     directory: "/python_dependencies/common/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "nayib-jose-gloria"
+#     groups:
+#       formatters:
+#         patterns:
+#           - "black"
+#           - "ruff"
+#       test-runners:
+#         patterns:
+#           - "pytest"
+#           - "coverage"
+#           - "allure"
+#   - package-ecosystem: npm
+#     directory: "/frontend/"
+#     open-pull-requests-limit: 3
+#     schedule:
+#       interval: "weekly"
+#       day: "sunday"
+#     assignees:
+#       - "tihuan"