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Issues list

Combining some steps enhancement New feature or request
#71 opened Feb 16, 2022 by jpfeuffer
Merge things needed for both pipelines enhancement New feature or request
#75 opened Feb 17, 2022 by jpfeuffer
Support multiple enzymes enhancement New feature or request
#79 opened Feb 18, 2022 by jpfeuffer
Add some CI checks for readthedocs branch enhancement New feature or request
#84 opened Mar 7, 2022 by jpfeuffer
Adhere to coding standards enhancement New feature or request
#144 opened Mar 24, 2022 by jpfeuffer
Make modules more flexible enhancement New feature or request
#146 opened Mar 25, 2022 by jpfeuffer
Setting comet search parameters
#150 opened Apr 6, 2022 by radusuciu
MSstats results should be "injected" into mzTab enhancement New feature or request
#165 opened Apr 29, 2022 by ypriverol
Add more elaborate experimental design validation enhancement New feature or request
#68 opened Feb 8, 2022 by jpfeuffer
[STYLE] Enforce some coding standards for our modules enhancement New feature or request
#172 opened May 2, 2022 by jpfeuffer
3 of 4 tasks
second release 1.1
Inmunopeptidomics, quantms and non-enzymatic searches documentation Improvements or additions to documentation enhancement New feature or request help wanted Extra attention is needed low-priority question Further information is requested
#197 opened Jun 16, 2022 by ypriverol
Ascore in all the Phospho datasets enhancement New feature or request
#211 opened Aug 5, 2022 by ypriverol
Enable MBR in DIA-NN step enhancement New feature or request
#238 opened Nov 1, 2022 by daichengxin
Error memory TMT dataset PXD012574 bug Something isn't working high-priority
#246 opened Nov 24, 2022 by ypriverol
Another MSstats error bug Something isn't working high-priority
#250 opened Dec 3, 2022 by ypriverol
PXD014414 problems bug Something isn't working enhancement New feature or request high-priority
#251 opened Dec 3, 2022 by ypriverol
Bug with LFQ data bug Something isn't working
#255 opened Dec 16, 2022 by ypriverol
pmultiqc Error with Spec Counting. bug Something isn't working
#259 opened Jan 1, 2023 by ypriverol
TMT16plex correction_matrix is missing enhancement New feature or request
#473 opened Jan 16, 2025 by cecilia992
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