Added cyno and kidney cell types #421
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| name: Run doctests | |
| on: [push, pull_request] | |
| jobs: | |
| doc-test-job: | |
| name: Doctests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out the repo | |
| uses: actions/checkout@v3 | |
| - uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniconda-version: "latest" | |
| - name: Bash | |
| shell: bash -l {0} | |
| run: | | |
| conda install -c conda-forge mamba | |
| mamba init | |
| source ~/.bashrc | |
| mamba env create -f environment.yml | |
| mamba activate besca_dev | |
| pip install pytest | |
| cd besca | |
| export PYTHONDONTWRITEBYTECODE=1 | |
| pytest --doctest-modules -W ignore::PendingDeprecationWarning --durations=0 | |
| cd .. | |
| pytest |