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  1. uDance uDance Public

    Java 43 6

  2. apples apples Public

    distance based phylogenetic placement

    Python 25 5

  3. misa misa Public

    mixed sample analysis

    Python 3

  4. raphael-group/hatchet raphael-group/hatchet Public

    HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, a…

    Roff 68 32

  5. niemasd/TreeCluster niemasd/TreeCluster Public

    Efficient phylogenetic clustering of viral sequences

    Python 76 9

  6. snakemake-tutorial2 snakemake-tutorial2 Public

    Short snakemake tutorial

    Python 2