-
-
Notifications
You must be signed in to change notification settings - Fork 129
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge pull request #291 from brechmos-stsci/tester-script
WIP: Updating the update script for the testers
- Loading branch information
Showing
2 changed files
with
43 additions
and
9 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,23 +1,24 @@ | ||
#! /bin/sh | ||
|
||
echo "Going to update conda environment test-cubeviz-conda" | ||
|
||
set -eu | ||
|
||
conda_env=`conda env list | grep '*' | cut -d\ -f1` | ||
min_conda_version="4.4" | ||
download_location="https://raw.githubusercontent.com/spacetelescope/cubeviz/master/scripts/update_cubeviz_test_env_pip" | ||
|
||
if [ "$conda_env" != "test-cubeviz-conda" ]; then | ||
echo "Must be in the test-cubeviz-conda conda environment" | ||
exit 1 | ||
fi | ||
|
||
conda_version=$(conda --version | cut -d\ -f2 | cut -d. -f1,2) | ||
if [[ "$conda_version" < "$min_conda_version" ]]; then | ||
echo "WARNING: your conda version is out of date ($(conda --version))." \ | ||
"This may cause issues with installing the latest version of cubeviz" \ | ||
"and its dependencies." | ||
fi | ||
# Grab the script: | ||
echo "Downloading the update script" | ||
output_file=`mktemp` | ||
|
||
conda update --update-deps -c glueviz/label/dev -c glueviz -c http://ssb.stsci.edu/astroconda-dev cubeviz --yes | ||
# https://stackoverlfow.com/questions/14411103/check-for-existence-of-wget-curl | ||
wget -O - --no-check-certificate $download_location > $output_file || curl -o $output_file $download_location | ||
|
||
echo "CubeViz test environment has been updated to the following:" | ||
conda list "cubeviz|glue-core|specviz|specutils|spectral-cube" | ||
echo "Running the update script $output_file" | ||
sh $output_file |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,33 @@ | ||
#! /bin/sh | ||
|
||
glue_hash="cc1dc09bff7113ab679a75dd7617456c5f85e005" | ||
spectral_cube_hash="cd06db6c5658baa2e182565b4fc6b337e383c8f1" | ||
specviz_hash="437e5ca0d1da6b1099f89d2ee6230b19ff785796" | ||
cubeviz_hash="029302d36722d765a8dea2f38638ff1856c23e65" | ||
specutils_hash="legacy-specutils" | ||
astropy_hash="46b59dddfba1e24f39e64dccbd9eb6488e1f8df0" | ||
|
||
set -eu | ||
|
||
echo "Checking to make sure we are in the right conda environment" | ||
conda_env=`conda env list | grep '*' | cut -d\ -f1` | ||
if [ "$conda_env" != "test-cubeviz-conda" ]; then | ||
echo "Must be in the test-cubeviz-conda conda environment" | ||
exit 1 | ||
fi | ||
|
||
# Remove anything installed by conda, if there is an error, i.e., no packages | ||
# then continue processing | ||
echo "Remove a few of the conda packages we want to replace" | ||
conda remove astropy glue-core spectral-cube specviz cubeviz specutils || true | ||
|
||
# Install specific versions of each packages | ||
echo "pip install the packages based on the commit hashes" | ||
pip install --upgrade \ | ||
git+https://github.com/glue-viz/glue@${glue_hash} \ | ||
git+https://github.com/radio-astro-tools/spectral-cube@${spectral_cube_hash} \ | ||
git+https://github.com/spacetelescope/specviz@${specviz_hash} \ | ||
git+https://github.com/spacetelescope/cubeviz@${cubeviz_hash} \ | ||
git+https://github.com/astropy/specutils.git@${specutils_hash} \ | ||
git+https://github.com/astropy/astropy@${astropy_hash}#egg=astropy | ||
|