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Update subworkflows/local/bam_variant_calling_cnvkit/main.nf
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FriederikeHanssen authored Jul 30, 2024
1 parent 425fb91 commit b7d79bf
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion subworkflows/local/bam_variant_calling_cnvkit/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,8 @@ workflow BAM_VARIANT_CALLING_CNVKIT {

versions = versions.mix(CNVKIT_BATCH.out.versions)
versions = versions.mix(CNVKIT_GENEMETRICS.out.versions)

versions = versions.mix( CNVKIT_CALL.out.versions)
versions = versions.mix( CNVKIT_EXPORT.out.versions)
emit:
cnv_calls_raw = CNVKIT_CALL.out.cns // channel: [ meta, cns ]
cnv_calls_export = CNVKIT_EXPORT.out.output // channel: [ meta, export_format ]
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