[91] - Adding CT loading functionality to web interface

[NewtonSander]

Introduction

#91 - Adding the possibility of loading a custom CT scan to the web interface

Behavior

The user has to upload two files, one will be the .nii or .zip with the dicom files, the other will be a .json containing the mapping between the material layer names and the layer number, like this:

{  
    "water": 0,
    "brain": 1,
    "trabecular_bone": 2
}

After performing the upload, the CT scan is available on the CT Scan section of the web interface

Usage

Download and extract ct-scans.zip
Start the web server, click the CT Scan toggle and select a pair of two files with the same name from the extracted folder to make the upload.

[codecov-commenter]

Codecov Report

Attention: 2 lines in your changes are missing coverage. Please review.

Files	Coverage Δ
.../neurotechdevkit/scenarios/built_in/_scenario_2.py	98.88% <ø> (ø)
src/neurotechdevkit/grid.py	92.59% <77.77%> (-0.27%)	⬇️

... and 1 file with indirect coverage changes

📢 Thoughts on this report? Let us know!.

[charlesbmi]

Nice work on this. I couldn't quite get it to run locally - perhaps I wasn't extracting ct-scans.zip to the right location? Happy to show my setup over video-call some time if that would be helpful.

Also, are you going to merge implementing_web_ui first and then redirect this branch to main?

That implementing_web_ui PR looked almost done - feel free to let me know when it is ready for another review :)