Integration test for run_dicom_archive_loader.py
#317
Workflow file for this run
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| name: Python checks | |
| on: | |
| pull_request: | |
| push: | |
| branches: | |
| - 'main' | |
| - '*-release' | |
| jobs: | |
| ruff: | |
| name: Lints | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11", "3.12"] | |
| steps: | |
| - name: Check out LORIS-MRI | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: ./.github/actions/setup-python | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Run Ruff | |
| run: ruff check --output-format=github | |
| pyright-strict: | |
| name: Strict type checks | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11", "3.12"] | |
| steps: | |
| - name: Check out LORIS-MRI | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: ./.github/actions/setup-python | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| # Like in the other Pyright run, the `jq` arcane is used to translate the errors from JSON to | |
| # the GitHub actions format | |
| - name: Run Pyright | |
| run: | | |
| pyright --outputjson | jq -r '.generalDiagnostics[] | "::error file=\(.file),line=\(.range.start.line),col=\(.range.start.character)::\(.message)"' | |
| (exit ${PIPESTATUS[0]}) | |
| pyrigh-global: | |
| name: Global type checks | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11", "3.12"] | |
| steps: | |
| - name: Check out LORIS-MRI | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: ./.github/actions/setup-python | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Run Pyright | |
| run: | | |
| cd test | |
| pyright --outputjson | jq -r '.generalDiagnostics[] | "::error file=\(.file),line=\(.range.start.line),col=\(.range.start.character)::\(.message)"' | |
| (exit ${PIPESTATUS[0]}) | |
| pytest: | |
| name: Unit tests | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.11", "3.12"] | |
| steps: | |
| - name: Check out LORIS-MRI | |
| uses: actions/checkout@v4 | |
| - name: Set up Python | |
| uses: ./.github/actions/setup-python | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Run Pytest | |
| run: pytest python/tests/unit |