Read outlines or masks from `segmentation_file_regex` parameter (#25) #17

	---
	# used for publishing documentation on push to main or published release
	name: publish docs

	on:
	push:
	branches:
	- main
	release:
	types:
	- published

	jobs:
	build:
	# only build and deploy docs if the actor is not dependabot
	if: ${{ github.actor != 'dependabot[bot]' }}
	runs-on: ubuntu-22.04
	steps:
	- name: Checkout
	uses: actions/checkout@v4
	with:
	fetch-depth: 0
	- uses: actions/setup-python@v5
	with:
	python-version: "3.11"
	- name: Setup for poetry
	run: \|
	python -m pip install poetry poetry-dynamic-versioning
	- name: poetry deps
	run: poetry install
	- name: Build documentation
	run: \|
	mkdir pages
	touch pages/.nojekyll
	cd docs
	poetry run sphinx-build src build
	# remove any doctrees dirs which aren't needed for publishing
	find ./build -type d -name '.doctrees' -exec rm -rf {} +
	cp -r build/* ../pages/
	- name: Deploy documentation
	uses: JamesIves/github-pages-deploy-action@v4
	with:
	branch: pages
	folder: pages

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