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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": { | ||
"vscode": { | ||
"languageId": "plaintext" | ||
} | ||
}, | ||
"outputs": [], | ||
"source": [ | ||
"# Import necessary libraries\n", | ||
"import numpy as np\n", | ||
"import pandas as pd\n", | ||
"import matplotlib.pyplot as plt\n", | ||
"import seaborn as sns\n", | ||
"from sklearn.ensemble import IsolationForest\n", | ||
"from sklearn.cluster import KMeans\n", | ||
"from sklearn.preprocessing import StandardScaler\n", | ||
"from sklearn.metrics import confusion_matrix, classification_report\n", | ||
"from sklearn.decomposition import PCA\n", | ||
"\n", | ||
"# Set plot style\n", | ||
"sns.set(style=\"whitegrid\")\n", | ||
"\n", | ||
"# Load Dataset\n", | ||
"# Replace 'data.csv' with your dataset file\n", | ||
"data = pd.read_csv('data.csv')\n", | ||
"\n", | ||
"# Display the first few rows\n", | ||
"data.head()\n" | ||
] | ||
} | ||
], | ||
"metadata": { | ||
"language_info": { | ||
"name": "python" | ||
} | ||
}, | ||
"nbformat": 4, | ||
"nbformat_minor": 2 | ||
} |
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# anomalies_report.py | ||
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import pandas as pd | ||
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# Load preprocessed data | ||
data = pd.read_csv('preprocessed_data.csv') | ||
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# Identify anomalies based on both clustering and isolation forest | ||
anomalies_kmeans = data[data['Cluster'] == 1] # From KMeans | ||
anomalies_isoforest = data[data['Anomaly'] == 1] # From Isolation Forest | ||
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# Combine and save identified anomalies from both methods | ||
anomalies_report = pd.concat([anomalies_kmeans, anomalies_isoforest]).drop_duplicates() | ||
anomalies_report.to_csv('anomalies_report.csv', index=False) | ||
print("Anomalies report saved as 'anomalies_report.csv'.") |
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# data_preprocessing.py | ||
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import pandas as pd | ||
from sklearn.preprocessing import StandardScaler | ||
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# Load dataset | ||
data = pd.read_csv('raw_data.csv') # Replace with the actual path to your dataset | ||
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# Check for missing values and drop rows with missing values | ||
data = data.dropna() | ||
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# Standardize data | ||
scaler = StandardScaler() | ||
data_scaled = scaler.fit_transform(data) | ||
data_scaled = pd.DataFrame(data_scaled, columns=data.columns) | ||
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# Save preprocessed data to CSV | ||
data_scaled.to_csv('preprocessed_data.csv', index=False) | ||
print("Preprocessed data saved to 'preprocessed_data.csv'.") |
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# eda_visualizations.py | ||
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import pandas as pd | ||
import matplotlib.pyplot as plt | ||
import seaborn as sns | ||
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# Load preprocessed data | ||
data = pd.read_csv('preprocessed_data.csv') | ||
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# Set plot style | ||
sns.set(style="whitegrid") | ||
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# Plot feature distributions | ||
fig, axes = plt.subplots(nrows=2, ncols=3, figsize=(15, 10)) | ||
axes = axes.flatten() | ||
for i, col in enumerate(data.columns): | ||
sns.histplot(data[col], kde=True, ax=axes[i]) | ||
axes[i].set_title(f"Distribution of {col}") | ||
plt.tight_layout() | ||
plt.savefig('eda_feature_distributions.png') | ||
plt.show() |
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38
Anomaly Detection Project/isolation_forest_anomaly_detection.py
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# isolation_forest_anomaly_detection.py | ||
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import pandas as pd | ||
from sklearn.ensemble import IsolationForest | ||
import joblib | ||
from sklearn.decomposition import PCA | ||
import matplotlib.pyplot as plt | ||
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# Load preprocessed data | ||
data = pd.read_csv('preprocessed_data.csv') | ||
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# Set Isolation Forest parameters | ||
contamination_rate = 0.05 # Adjust this value based on your dataset and anomaly expectations | ||
max_samples_value = "auto" # Can be an integer or "auto" (256 or total sample size, whichever is smaller) | ||
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# Isolation Forest with custom parameters | ||
iso_forest = IsolationForest(contamination=contamination_rate, max_samples=max_samples_value, random_state=42) | ||
data['Anomaly'] = iso_forest.fit_predict(data) | ||
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# Convert labels for anomalies | ||
data['Anomaly'] = data['Anomaly'].apply(lambda x: 1 if x == -1 else 0) | ||
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# Save the Isolation Forest model | ||
joblib.dump(iso_forest, 'isolation_forest_model.pkl') | ||
print("Isolation Forest model saved as 'isolation_forest_model.pkl'.") | ||
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# Visualize anomalies with PCA | ||
pca = PCA(n_components=2) | ||
pca_data = pca.fit_transform(data.drop(columns=['Anomaly'])) | ||
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plt.figure(figsize=(10, 6)) | ||
plt.scatter(pca_data[:, 0], pca_data[:, 1], c=data['Anomaly'], cmap='coolwarm', marker='o', alpha=0.6) | ||
plt.title("Isolation Forest Anomaly Detection with PCA") | ||
plt.xlabel("PCA Component 1") | ||
plt.ylabel("PCA Component 2") | ||
plt.colorbar(label="Anomaly") | ||
plt.savefig('isolation_forest_anomalies_pca.png') | ||
plt.show() |
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# kmeans_anomaly_detection.py | ||
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import pandas as pd | ||
from sklearn.cluster import KMeans | ||
import joblib | ||
from sklearn.decomposition import PCA | ||
import matplotlib.pyplot as plt | ||
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# Load preprocessed data | ||
data = pd.read_csv('preprocessed_data.csv') | ||
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# KMeans Clustering | ||
kmeans = KMeans(n_clusters=2, random_state=42) | ||
kmeans.fit(data) | ||
data['Cluster'] = kmeans.labels_ | ||
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# Save the KMeans model | ||
joblib.dump(kmeans, 'kmeans_model.pkl') | ||
print("KMeans model saved as 'kmeans_model.pkl'.") | ||
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# Identify anomalies based on cluster assignment | ||
anomalies_kmeans = data[data['Cluster'] == 1] | ||
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# Visualize clusters with PCA | ||
pca = PCA(n_components=2) | ||
pca_data = pca.fit_transform(data.drop(columns=['Cluster'])) | ||
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plt.figure(figsize=(10, 6)) | ||
plt.scatter(pca_data[:, 0], pca_data[:, 1], c=data['Cluster'], cmap='viridis', marker='o', alpha=0.6) | ||
plt.title("KMeans Clustering with PCA") | ||
plt.xlabel("PCA Component 1") | ||
plt.ylabel("PCA Component 2") | ||
plt.colorbar(label="Cluster") | ||
plt.savefig('kmeans_clusters_pca.png') | ||
plt.show() |
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# model_evaluation.py | ||
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import pandas as pd | ||
from sklearn.metrics import confusion_matrix, classification_report | ||
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# Load data with true labels (replace 'TrueLabels' with the actual column if available) | ||
data = pd.read_csv('preprocessed_data.csv') | ||
# Assuming `TrueLabels` column exists in the original data | ||
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# Evaluate Isolation Forest Model | ||
# Assuming 'TrueLabels' is in the original data and represents ground truth for anomalies | ||
# Uncomment and use if true labels are available | ||
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# true_labels = data['TrueLabels'] | ||
# print("Confusion Matrix (Isolation Forest):\n", confusion_matrix(true_labels, data['Anomaly'])) | ||
# print("Classification Report (Isolation Forest):\n", classification_report(true_labels, data['Anomaly'])) | ||
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# Save the evaluation report to file | ||
# with open("evaluation_report.txt", "w") as f: | ||
# f.write("Confusion Matrix (Isolation Forest):\n") | ||
# f.write(str(confusion_matrix(true_labels, data['Anomaly'])) + "\n\n") | ||
# f.write("Classification Report (Isolation Forest):\n") | ||
# f.write(classification_report(true_labels, data['Anomaly'])) |
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